Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 AC022616.5-201ENST00000518796 181 ntBASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 AL499627.2-201ENST00000606283 725 ntBASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 AL513477.1-201ENST00000602865 2407 ntBASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 MST1L-201ENST00000442552 2185 ntBASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 AC068587.7-201ENST00000641602 218 ntBASIC15.27■□□□□ 0.04
SMCO4Q9NRQ5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMCO4Q9NRQ5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SMCO4Q9NRQ5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SMCO4Q9NRQ5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMCO4Q9NRQ5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMCO4Q9NRQ5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.25■□□□□ 0.03
SMCO4Q9NRQ5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMCO4Q9NRQ5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms