Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLPBQ9H078 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPBQ9H078 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.53■□□□□ 0.72
CLPBQ9H078 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLPBQ9H078 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPBQ9H078 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.53■□□□□ 0.72
CLPBQ9H078 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLPBQ9H078 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLPBQ9H078 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPBQ9H078 AC211429.1-201ENST00000415277 523 ntBASIC19.53■□□□□ 0.72
CLPBQ9H078 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.53■□□□□ 0.72
CLPBQ9H078 MIR4785-201ENST00000585005 73 ntBASIC19.53■□□□□ 0.72
CLPBQ9H078 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.53■□□□□ 0.72
CLPBQ9H078 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.53■□□□□ 0.72
CLPBQ9H078 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.53■□□□□ 0.72
CLPBQ9H078 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.53■□□□□ 0.72
CLPBQ9H078 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPBQ9H078 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.53■□□□□ 0.72
CLPBQ9H078 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLPBQ9H078 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLPBQ9H078 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLPBQ9H078 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPBQ9H078 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPBQ9H078 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.52■□□□□ 0.72
CLPBQ9H078 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLPBQ9H078 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPBQ9H078 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CLPBQ9H078 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPBQ9H078 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.52■□□□□ 0.72
CLPBQ9H078 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CLPBQ9H078 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.52■□□□□ 0.72
CLPBQ9H078 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLPBQ9H078 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.52■□□□□ 0.72
CLPBQ9H078 AF186192.3-201ENST00000583427 947 ntBASIC19.52■□□□□ 0.72
CLPBQ9H078 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLPBQ9H078 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPBQ9H078 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.52■□□□□ 0.72
CLPBQ9H078 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLPBQ9H078 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPBQ9H078 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPBQ9H078 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.52■□□□□ 0.71
CLPBQ9H078 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CLPBQ9H078 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.52■□□□□ 0.71
CLPBQ9H078 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLPBQ9H078 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLPBQ9H078 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLPBQ9H078 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLPBQ9H078 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLPBQ9H078 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CLPBQ9H078 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CLPBQ9H078 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.51■□□□□ 0.71
CLPBQ9H078 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.51■□□□□ 0.71
CLPBQ9H078 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.51■□□□□ 0.71
CLPBQ9H078 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.51■□□□□ 0.71
CLPBQ9H078 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.51■□□□□ 0.71
CLPBQ9H078 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.51■□□□□ 0.71
CLPBQ9H078 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 TFP1-202ENST00000475455 1573 ntBASIC19.51■□□□□ 0.71
CLPBQ9H078 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
CLPBQ9H078 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLPBQ9H078 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.51■□□□□ 0.71
CLPBQ9H078 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CLPBQ9H078 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPBQ9H078 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.51■□□□□ 0.71
CLPBQ9H078 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPBQ9H078 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
CLPBQ9H078 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLPBQ9H078 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.5■□□□□ 0.71
CLPBQ9H078 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPBQ9H078 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.5■□□□□ 0.71
CLPBQ9H078 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPBQ9H078 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLPBQ9H078 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLPBQ9H078 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPBQ9H078 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPBQ9H078 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPBQ9H078 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLPBQ9H078 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.5■□□□□ 0.71
CLPBQ9H078 AL355075.4-201ENST00000554988 638 ntBASIC19.5■□□□□ 0.71
CLPBQ9H078 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.5■□□□□ 0.71
CLPBQ9H078 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.5■□□□□ 0.71
CLPBQ9H078 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.5■□□□□ 0.71
CLPBQ9H078 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPBQ9H078 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLPBQ9H078 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms