Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ARID3AQ99856 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.96■■□□□ 1.11
ARID3AQ99856 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.96■■□□□ 1.11
ARID3AQ99856 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.96■■□□□ 1.11
ARID3AQ99856 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.96■■□□□ 1.11
ARID3AQ99856 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARID3AQ99856 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARID3AQ99856 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARID3AQ99856 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARID3AQ99856 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
ARID3AQ99856 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.95■■□□□ 1.1
ARID3AQ99856 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ARID3AQ99856 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
ARID3AQ99856 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
ARID3AQ99856 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARID3AQ99856 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.95■■□□□ 1.1
ARID3AQ99856 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.95■■□□□ 1.1
ARID3AQ99856 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
ARID3AQ99856 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ARID3AQ99856 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ARID3AQ99856 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARID3AQ99856 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.95■■□□□ 1.1
ARID3AQ99856 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
ARID3AQ99856 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARID3AQ99856 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ARID3AQ99856 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
ARID3AQ99856 AC093787.1-201ENST00000450396 207 ntBASIC21.94■■□□□ 1.1
ARID3AQ99856 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.94■■□□□ 1.1
ARID3AQ99856 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.94■■□□□ 1.1
ARID3AQ99856 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.94■■□□□ 1.1
ARID3AQ99856 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ARID3AQ99856 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.94■■□□□ 1.1
ARID3AQ99856 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARID3AQ99856 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 CYP21A1P-202ENST00000354927 1481 ntBASIC21.93■■□□□ 1.1
ARID3AQ99856 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ARID3AQ99856 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.93■■□□□ 1.1
ARID3AQ99856 AC099398.1-201ENST00000567919 2776 ntBASIC21.93■■□□□ 1.1
ARID3AQ99856 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.93■■□□□ 1.1
ARID3AQ99856 MIR2861-201ENST00000636310 90 ntBASIC21.93■■□□□ 1.1
ARID3AQ99856 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.93■■□□□ 1.1
ARID3AQ99856 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARID3AQ99856 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
ARID3AQ99856 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.92■■□□□ 1.1
ARID3AQ99856 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.92■■□□□ 1.1
ARID3AQ99856 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ARID3AQ99856 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.92■■□□□ 1.1
ARID3AQ99856 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.92■■□□□ 1.1
ARID3AQ99856 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
ARID3AQ99856 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.92■■□□□ 1.1
ARID3AQ99856 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
ARID3AQ99856 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARID3AQ99856 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.92■■□□□ 1.1
ARID3AQ99856 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.92■■□□□ 1.1
ARID3AQ99856 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.92■■□□□ 1.1
ARID3AQ99856 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ARID3AQ99856 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ARID3AQ99856 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ARID3AQ99856 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ARID3AQ99856 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ARID3AQ99856 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ARID3AQ99856 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ARID3AQ99856 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
ARID3AQ99856 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms