Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB5BP61020 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB5BP61020 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB5BP61020 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB5BP61020 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RAB5BP61020 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB5BP61020 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB5BP61020 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB5BP61020 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB5BP61020 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB5BP61020 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB5BP61020 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAB5BP61020 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB5BP61020 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RAB5BP61020 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RAB5BP61020 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB5BP61020 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
RAB5BP61020 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB5BP61020 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB5BP61020 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB5BP61020 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RAB5BP61020 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB5BP61020 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB5BP61020 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB5BP61020 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB5BP61020 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 ABALON-201ENST00000629058 1903 ntBASIC15.24■□□□□ 0.03
RAB5BP61020 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB5BP61020 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB5BP61020 LINC00896-202ENST00000609602 2128 ntBASIC15.24■□□□□ 0.03
RAB5BP61020 AC022413.1-201ENST00000624602 984 ntBASIC15.24■□□□□ 0.03
RAB5BP61020 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB5BP61020 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB5BP61020 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAB5BP61020 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB5BP61020 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB5BP61020 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB5BP61020 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB5BP61020 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB5BP61020 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB5BP61020 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB5BP61020 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB5BP61020 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB5BP61020 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RAB5BP61020 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB5BP61020 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB5BP61020 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB5BP61020 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB5BP61020 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms