Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA2P01906 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 AC098818.2-201ENST00000564925 2320 ntBASIC17.43■□□□□ 0.38
HLA-DQA2P01906 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DQA2P01906 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 Z82202.1-201ENST00000623446 1880 ntBASIC17.42■□□□□ 0.38
HLA-DQA2P01906 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 CROCCP5-201ENST00000436658 830 ntBASIC17.42■□□□□ 0.38
HLA-DQA2P01906 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 AC083906.2-201ENST00000511578 360 ntBASIC17.42■□□□□ 0.38
HLA-DQA2P01906 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 AL121832.2-201ENST00000610979 668 ntBASIC17.42■□□□□ 0.38
HLA-DQA2P01906 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA2P01906 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 RNF165-205ENST00000588679 2904 ntBASIC17.41■□□□□ 0.38
HLA-DQA2P01906 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 AL032819.2-201ENST00000624543 2162 ntBASIC17.41■□□□□ 0.38
HLA-DQA2P01906 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 SLC29A4P1-201ENST00000398760 971 ntBASIC17.41■□□□□ 0.38
HLA-DQA2P01906 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 MIPEPP3-201ENST00000412105 444 ntBASIC17.41■□□□□ 0.38
HLA-DQA2P01906 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQA2P01906 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA2P01906 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms