Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.53■□□□□ 0.4
ZIC3O60481 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZIC3O60481 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZIC3O60481 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZIC3O60481 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZIC3O60481 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZIC3O60481 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZIC3O60481 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZIC3O60481 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.52■□□□□ 0.4
ZIC3O60481 MESTP1-201ENST00000404287 994 ntBASIC17.52■□□□□ 0.4
ZIC3O60481 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ZIC3O60481 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.52■□□□□ 0.4
ZIC3O60481 AC011506.1-201ENST00000474329 610 ntBASIC17.52■□□□□ 0.4
ZIC3O60481 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.52■□□□□ 0.4
ZIC3O60481 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.52■□□□□ 0.4
ZIC3O60481 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ZIC3O60481 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.52■□□□□ 0.4
ZIC3O60481 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.52■□□□□ 0.4
ZIC3O60481 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.52■□□□□ 0.4
ZIC3O60481 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ZIC3O60481 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ZIC3O60481 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.52■□□□□ 0.39
ZIC3O60481 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZIC3O60481 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZIC3O60481 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ZIC3O60481 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZIC3O60481 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ZIC3O60481 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZIC3O60481 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZIC3O60481 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ZIC3O60481 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.51■□□□□ 0.39
ZIC3O60481 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.51■□□□□ 0.39
ZIC3O60481 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZIC3O60481 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.51■□□□□ 0.39
ZIC3O60481 Z85996.1-201ENST00000494644 937 ntBASIC17.51■□□□□ 0.39
ZIC3O60481 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ZIC3O60481 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.51■□□□□ 0.39
ZIC3O60481 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZIC3O60481 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.51■□□□□ 0.39
ZIC3O60481 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.51■□□□□ 0.39
ZIC3O60481 MIR6786-201ENST00000616843 113 ntBASIC17.51■□□□□ 0.39
ZIC3O60481 AC130371.2-201ENST00000619443 611 ntBASIC17.51■□□□□ 0.39
ZIC3O60481 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.51■□□□□ 0.39
ZIC3O60481 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ZIC3O60481 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.51■□□□□ 0.39
ZIC3O60481 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ZIC3O60481 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.51■□□□□ 0.39
ZIC3O60481 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
ZIC3O60481 FSCN1P1-201ENST00000568912 1481 ntBASIC17.5■□□□□ 0.39
ZIC3O60481 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.5■□□□□ 0.39
ZIC3O60481 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ZIC3O60481 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.5■□□□□ 0.39
ZIC3O60481 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.5■□□□□ 0.39
ZIC3O60481 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 B3GAT3P1-201ENST00000471720 806 ntBASIC17.5■□□□□ 0.39
ZIC3O60481 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ZIC3O60481 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.5■□□□□ 0.39
ZIC3O60481 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.5■□□□□ 0.39
ZIC3O60481 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.5■□□□□ 0.39
ZIC3O60481 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.5■□□□□ 0.39
ZIC3O60481 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.5■□□□□ 0.39
ZIC3O60481 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ZIC3O60481 AC104417.2-201ENST00000562989 1793 ntBASIC17.5■□□□□ 0.39
ZIC3O60481 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.5■□□□□ 0.39
ZIC3O60481 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.5■□□□□ 0.39
ZIC3O60481 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZIC3O60481 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.5■□□□□ 0.39
ZIC3O60481 ZNF815P-204ENST00000434898 1737 ntBASIC17.5■□□□□ 0.39
ZIC3O60481 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
ZIC3O60481 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.49■□□□□ 0.39
ZIC3O60481 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ZIC3O60481 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ZIC3O60481 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 AC008040.2-201ENST00000461049 708 ntBASIC17.49■□□□□ 0.39
ZIC3O60481 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.49■□□□□ 0.39
ZIC3O60481 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.49■□□□□ 0.39
ZIC3O60481 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.49■□□□□ 0.39
ZIC3O60481 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.49■□□□□ 0.39
ZIC3O60481 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.49■□□□□ 0.39
ZIC3O60481 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.49■□□□□ 0.39
ZIC3O60481 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms