Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.47■□□□□ 0.71
MID1O15344 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MID1O15344 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.47■□□□□ 0.71
MID1O15344 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.47■□□□□ 0.71
MID1O15344 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
MID1O15344 LINC01006-201ENST00000333319 2292 ntBASIC19.46■□□□□ 0.71
MID1O15344 AC096733.2-201ENST00000609937 1394 ntBASIC19.46■□□□□ 0.71
MID1O15344 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
MID1O15344 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.46■□□□□ 0.71
MID1O15344 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.46■□□□□ 0.71
MID1O15344 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.46■□□□□ 0.71
MID1O15344 AC010203.1-204ENST00000548782 407 ntBASIC19.46■□□□□ 0.71
MID1O15344 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.46■□□□□ 0.71
MID1O15344 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.46■□□□□ 0.71
MID1O15344 AL049597.2-201ENST00000565575 961 ntBASIC19.46■□□□□ 0.71
MID1O15344 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MID1O15344 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.46■□□□□ 0.71
MID1O15344 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MID1O15344 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MID1O15344 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MID1O15344 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MID1O15344 AL157384.1-201ENST00000445995 2473 ntBASIC19.45■□□□□ 0.7
MID1O15344 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MID1O15344 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.45■□□□□ 0.7
MID1O15344 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.45■□□□□ 0.7
MID1O15344 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.45■□□□□ 0.7
MID1O15344 AL445228.2-201ENST00000605589 952 ntBASIC19.45■□□□□ 0.7
MID1O15344 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MID1O15344 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.45■□□□□ 0.7
MID1O15344 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.45■□□□□ 0.7
MID1O15344 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.45■□□□□ 0.7
MID1O15344 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.45■□□□□ 0.7
MID1O15344 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MID1O15344 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.44■□□□□ 0.7
MID1O15344 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
MID1O15344 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MID1O15344 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MID1O15344 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.44■□□□□ 0.7
MID1O15344 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MID1O15344 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.44■□□□□ 0.7
MID1O15344 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.44■□□□□ 0.7
MID1O15344 AC128688.1-201ENST00000487626 519 ntBASIC19.44■□□□□ 0.7
MID1O15344 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.44■□□□□ 0.7
MID1O15344 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
MID1O15344 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.44■□□□□ 0.7
MID1O15344 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MID1O15344 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.44■□□□□ 0.7
MID1O15344 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.44■□□□□ 0.7
MID1O15344 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MID1O15344 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MID1O15344 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MID1O15344 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MID1O15344 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
MID1O15344 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.43■□□□□ 0.7
MID1O15344 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MID1O15344 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.43■□□□□ 0.7
MID1O15344 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MID1O15344 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MID1O15344 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MID1O15344 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MID1O15344 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MID1O15344 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MID1O15344 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MID1O15344 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MID1O15344 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MID1O15344 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.43■□□□□ 0.7
MID1O15344 LIN28AP1-201ENST00000429574 405 ntBASIC19.43■□□□□ 0.7
MID1O15344 KRT18P35-201ENST00000510488 1269 ntBASIC19.43■□□□□ 0.7
MID1O15344 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.43■□□□□ 0.7
MID1O15344 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.43■□□□□ 0.7
MID1O15344 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MID1O15344 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.43■□□□□ 0.7
MID1O15344 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MID1O15344 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.43■□□□□ 0.7
MID1O15344 FAM87A-204ENST00000613235 858 ntBASIC19.43■□□□□ 0.7
MID1O15344 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MID1O15344 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MID1O15344 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms