Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
CACNB4O00305 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
CACNB4O00305 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNB4O00305 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNB4O00305 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNB4O00305 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.2■□□□□ 0.66
CACNB4O00305 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNB4O00305 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.2■□□□□ 0.66
CACNB4O00305 FITM1-202ENST00000559294 800 ntBASIC19.2■□□□□ 0.66
CACNB4O00305 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNB4O00305 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNB4O00305 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.2■□□□□ 0.66
CACNB4O00305 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNB4O00305 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNB4O00305 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CACNB4O00305 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNB4O00305 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CACNB4O00305 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNB4O00305 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNB4O00305 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CACNB4O00305 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CACNB4O00305 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNB4O00305 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.19■□□□□ 0.66
CACNB4O00305 MESTP1-201ENST00000404287 994 ntBASIC19.19■□□□□ 0.66
CACNB4O00305 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNB4O00305 AC011506.1-201ENST00000474329 610 ntBASIC19.19■□□□□ 0.66
CACNB4O00305 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNB4O00305 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.19■□□□□ 0.66
CACNB4O00305 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNB4O00305 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CACNB4O00305 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNB4O00305 RCC2P6-201ENST00000526625 1557 ntBASIC19.19■□□□□ 0.66
CACNB4O00305 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CACNB4O00305 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CACNB4O00305 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CACNB4O00305 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CACNB4O00305 TCF3P1-201ENST00000423021 1937 ntBASIC19.18■□□□□ 0.66
CACNB4O00305 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CACNB4O00305 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 AC004951.3-201ENST00000418645 1148 ntBASIC19.18■□□□□ 0.66
CACNB4O00305 AL390955.1-201ENST00000428694 934 ntBASIC19.18■□□□□ 0.66
CACNB4O00305 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.18■□□□□ 0.66
CACNB4O00305 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CACNB4O00305 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.18■□□□□ 0.66
CACNB4O00305 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 AC011298.2-201ENST00000617989 482 ntBASIC19.18■□□□□ 0.66
CACNB4O00305 AC097493.4-201ENST00000641197 219 ntBASIC19.18■□□□□ 0.66
CACNB4O00305 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CACNB4O00305 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.18■□□□□ 0.66
CACNB4O00305 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNB4O00305 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.17■□□□□ 0.66
CACNB4O00305 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNB4O00305 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNB4O00305 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.17■□□□□ 0.66
CACNB4O00305 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNB4O00305 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNB4O00305 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CACNB4O00305 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CACNB4O00305 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CACNB4O00305 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.17■□□□□ 0.66
CACNB4O00305 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNB4O00305 NAPSB-206ENST00000562112 1266 ntBASIC19.17■□□□□ 0.66
CACNB4O00305 AL160286.2-201ENST00000567150 934 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms