Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL121906.2-201ENST00000621597 723 ntBASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DRB4X5D2U9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 UNC93B5-201ENST00000530315 699 ntBASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 HCG11-201ENST00000411553 5696 ntBASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 AC116562.4-201ENST00000641316 2276 ntBASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DRB4X5D2U9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 AP000974.1-201ENST00000623909 2387 ntBASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 RNA5SP413-201ENST00000516373 109 ntBASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 AC008687.6-201ENST00000596318 630 ntBASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 AC120498.8-201ENST00000614275 531 ntBASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DRB4X5D2U9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DRB4X5D2U9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms