Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.22■□□□□ 0.51
CCDC71Q8IV32 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71Q8IV32 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71Q8IV32 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 AC026471.1-201ENST00000564629 3026 ntBASIC18.2■□□□□ 0.5
CCDC71Q8IV32 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 AL032819.2-201ENST00000624543 2162 ntBASIC18.2■□□□□ 0.5
CCDC71Q8IV32 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 RN7SL471P-201ENST00000580476 299 ntBASIC18.2■□□□□ 0.5
CCDC71Q8IV32 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 AC105020.6-201ENST00000621523 1217 ntBASIC18.2■□□□□ 0.5
CCDC71Q8IV32 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC71Q8IV32 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms