Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.89■□□□□ 0.3
ACKR3P25106 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ACKR3P25106 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ACKR3P25106 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.89■□□□□ 0.29
ACKR3P25106 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.89■□□□□ 0.29
ACKR3P25106 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.89■□□□□ 0.29
ACKR3P25106 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ACKR3P25106 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
ACKR3P25106 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ACKR3P25106 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.89■□□□□ 0.29
ACKR3P25106 AC069152.1-201ENST00000438030 544 ntBASIC16.89■□□□□ 0.29
ACKR3P25106 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.89■□□□□ 0.29
ACKR3P25106 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.89■□□□□ 0.29
ACKR3P25106 AC060766.5-201ENST00000590539 871 ntBASIC16.89■□□□□ 0.29
ACKR3P25106 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACKR3P25106 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.88■□□□□ 0.29
ACKR3P25106 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.88■□□□□ 0.29
ACKR3P25106 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.88■□□□□ 0.29
ACKR3P25106 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ACKR3P25106 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ACKR3P25106 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.88■□□□□ 0.29
ACKR3P25106 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.88■□□□□ 0.29
ACKR3P25106 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.88■□□□□ 0.29
ACKR3P25106 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.88■□□□□ 0.29
ACKR3P25106 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ACKR3P25106 AC133041.1-202ENST00000642053 222 ntBASIC16.88■□□□□ 0.29
ACKR3P25106 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.88■□□□□ 0.29
ACKR3P25106 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ACKR3P25106 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ACKR3P25106 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ACKR3P25106 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ACKR3P25106 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ACKR3P25106 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ACKR3P25106 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ACKR3P25106 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.87■□□□□ 0.29
ACKR3P25106 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.87■□□□□ 0.29
ACKR3P25106 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.87■□□□□ 0.29
ACKR3P25106 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.87■□□□□ 0.29
ACKR3P25106 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.87■□□□□ 0.29
ACKR3P25106 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.87■□□□□ 0.29
ACKR3P25106 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.87■□□□□ 0.29
ACKR3P25106 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.87■□□□□ 0.29
ACKR3P25106 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.87■□□□□ 0.29
ACKR3P25106 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ACKR3P25106 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ACKR3P25106 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ACKR3P25106 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.87■□□□□ 0.29
ACKR3P25106 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
ACKR3P25106 AL032819.2-201ENST00000624543 2162 ntBASIC16.87■□□□□ 0.29
ACKR3P25106 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.86■□□□□ 0.29
ACKR3P25106 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms