Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.18■□□□□ 0.5
PDGFAP04085 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.18■□□□□ 0.5
PDGFAP04085 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDGFAP04085 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFAP04085 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.18■□□□□ 0.5
PDGFAP04085 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PDGFAP04085 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDGFAP04085 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFAP04085 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDGFAP04085 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDGFAP04085 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDGFAP04085 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFAP04085 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDGFAP04085 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFAP04085 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFAP04085 ECEL1P2-202ENST00000465689 757 ntBASIC18.17■□□□□ 0.5
PDGFAP04085 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFAP04085 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.17■□□□□ 0.5
PDGFAP04085 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFAP04085 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFAP04085 AL031985.4-201ENST00000642138 673 ntBASIC18.17■□□□□ 0.5
PDGFAP04085 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFAP04085 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDGFAP04085 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDGFAP04085 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
PDGFAP04085 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFAP04085 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFAP04085 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PDGFAP04085 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFAP04085 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFAP04085 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFAP04085 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFAP04085 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFAP04085 C1QL1P1-201ENST00000568105 661 ntBASIC18.16■□□□□ 0.5
PDGFAP04085 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFAP04085 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFAP04085 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFAP04085 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFAP04085 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFAP04085 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFAP04085 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFAP04085 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.15■□□□□ 0.5
PDGFAP04085 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.15■□□□□ 0.5
PDGFAP04085 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PDGFAP04085 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDGFAP04085 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDGFAP04085 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 INGX-201ENST00000359239 846 ntBASIC18.15■□□□□ 0.5
PDGFAP04085 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
PDGFAP04085 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.15■□□□□ 0.5
PDGFAP04085 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.15■□□□□ 0.5
PDGFAP04085 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PDGFAP04085 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
PDGFAP04085 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PDGFAP04085 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.15■□□□□ 0.5
PDGFAP04085 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFAP04085 AL049796.1-201ENST00000565336 1766 ntBASIC18.14■□□□□ 0.5
PDGFAP04085 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDGFAP04085 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.14■□□□□ 0.5
PDGFAP04085 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDGFAP04085 FSCN1P1-201ENST00000568912 1481 ntBASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms