Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHGDHO43175 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 AC093503.3-201ENST00000624917 2352 ntBASIC19.35■□□□□ 0.69
PHGDHO43175 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.35■□□□□ 0.69
PHGDHO43175 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.35■□□□□ 0.69
PHGDHO43175 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.35■□□□□ 0.69
PHGDHO43175 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.35■□□□□ 0.69
PHGDHO43175 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.35■□□□□ 0.69
PHGDHO43175 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PHGDHO43175 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.35■□□□□ 0.69
PHGDHO43175 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PHGDHO43175 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PHGDHO43175 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.35■□□□□ 0.69
PHGDHO43175 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 LINC01465-201ENST00000408887 1940 ntBASIC19.35■□□□□ 0.69
PHGDHO43175 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PHGDHO43175 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHGDHO43175 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
PHGDHO43175 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHGDHO43175 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.34■□□□□ 0.69
PHGDHO43175 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHGDHO43175 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.34■□□□□ 0.69
PHGDHO43175 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.34■□□□□ 0.69
PHGDHO43175 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHGDHO43175 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
PHGDHO43175 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHGDHO43175 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHGDHO43175 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.34■□□□□ 0.69
PHGDHO43175 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PHGDHO43175 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.34■□□□□ 0.69
PHGDHO43175 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.34■□□□□ 0.69
PHGDHO43175 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PHGDHO43175 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHGDHO43175 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PHGDHO43175 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHGDHO43175 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHGDHO43175 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHGDHO43175 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PHGDHO43175 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PHGDHO43175 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.34■□□□□ 0.69
PHGDHO43175 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PHGDHO43175 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHGDHO43175 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHGDHO43175 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHGDHO43175 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PHGDHO43175 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.33■□□□□ 0.69
PHGDHO43175 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.33■□□□□ 0.69
PHGDHO43175 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PHGDHO43175 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHGDHO43175 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.33■□□□□ 0.68
PHGDHO43175 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHGDHO43175 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.33■□□□□ 0.68
PHGDHO43175 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PHGDHO43175 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHGDHO43175 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
PHGDHO43175 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHGDHO43175 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHGDHO43175 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHGDHO43175 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
PHGDHO43175 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHGDHO43175 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHGDHO43175 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.32■□□□□ 0.68
PHGDHO43175 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHGDHO43175 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHGDHO43175 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHGDHO43175 SLC29A4P1-201ENST00000398760 971 ntBASIC19.32■□□□□ 0.68
PHGDHO43175 TSPY6P-201ENST00000448518 926 ntBASIC19.32■□□□□ 0.68
PHGDHO43175 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.32■□□□□ 0.68
PHGDHO43175 RPS2P52-201ENST00000469610 820 ntBASIC19.32■□□□□ 0.68
PHGDHO43175 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PHGDHO43175 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PHGDHO43175 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.32■□□□□ 0.68
PHGDHO43175 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHGDHO43175 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.32■□□□□ 0.68
PHGDHO43175 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PHGDHO43175 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHGDHO43175 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHGDHO43175 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHGDHO43175 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.32■□□□□ 0.68
PHGDHO43175 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHGDHO43175 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHGDHO43175 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHGDHO43175 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHGDHO43175 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHGDHO43175 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHGDHO43175 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PHGDHO43175 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHGDHO43175 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms