Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASQ2O14958 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASQ2O14958 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASQ2O14958 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CASQ2O14958 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASQ2O14958 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.5■□□□□ 0.55
CASQ2O14958 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.5■□□□□ 0.55
CASQ2O14958 AC008175.2-201ENST00000612840 297 ntBASIC18.5■□□□□ 0.55
CASQ2O14958 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.5■□□□□ 0.55
CASQ2O14958 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASQ2O14958 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASQ2O14958 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CASQ2O14958 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASQ2O14958 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASQ2O14958 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CASQ2O14958 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASQ2O14958 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.49■□□□□ 0.55
CASQ2O14958 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CASQ2O14958 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CASQ2O14958 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.49■□□□□ 0.55
CASQ2O14958 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CASQ2O14958 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CASQ2O14958 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASQ2O14958 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.49■□□□□ 0.55
CASQ2O14958 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASQ2O14958 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASQ2O14958 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASQ2O14958 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CASQ2O14958 AC239859.2-201ENST00000444165 318 ntBASIC18.49■□□□□ 0.55
CASQ2O14958 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.49■□□□□ 0.55
CASQ2O14958 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.49■□□□□ 0.55
CASQ2O14958 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASQ2O14958 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.49■□□□□ 0.55
CASQ2O14958 CROCCP1-201ENST00000426910 5675 ntBASIC18.49■□□□□ 0.55
CASQ2O14958 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASQ2O14958 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASQ2O14958 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.49■□□□□ 0.55
CASQ2O14958 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASQ2O14958 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.49■□□□□ 0.55
CASQ2O14958 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.49■□□□□ 0.55
CASQ2O14958 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CASQ2O14958 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.48■□□□□ 0.55
CASQ2O14958 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.48■□□□□ 0.55
CASQ2O14958 NFIC-211ENST00000641145 8399 ntBASIC18.48■□□□□ 0.55
CASQ2O14958 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CASQ2O14958 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
CASQ2O14958 UNC93B8-201ENST00000511903 705 ntBASIC18.48■□□□□ 0.55
CASQ2O14958 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.48■□□□□ 0.55
CASQ2O14958 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
CASQ2O14958 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.48■□□□□ 0.55
CASQ2O14958 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CASQ2O14958 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.48■□□□□ 0.55
CASQ2O14958 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASQ2O14958 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CASQ2O14958 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.47■□□□□ 0.55
CASQ2O14958 Z98044.1-201ENST00000632503 1764 ntBASIC18.47■□□□□ 0.55
CASQ2O14958 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CASQ2O14958 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.47■□□□□ 0.55
CASQ2O14958 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.47■□□□□ 0.55
CASQ2O14958 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CASQ2O14958 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CASQ2O14958 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.47■□□□□ 0.55
CASQ2O14958 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.47■□□□□ 0.55
CASQ2O14958 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
CASQ2O14958 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CASQ2O14958 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.47■□□□□ 0.55
CASQ2O14958 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.47■□□□□ 0.55
CASQ2O14958 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CASQ2O14958 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CASQ2O14958 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CASQ2O14958 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms