Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SDHDO14521 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.82■□□□□ 0.6
SDHDO14521 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHDO14521 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHDO14521 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 AC007613.1-201ENST00000572811 2597 ntBASIC18.81■□□□□ 0.6
SDHDO14521 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHDO14521 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 AC093787.1-201ENST00000450396 207 ntBASIC18.81■□□□□ 0.6
SDHDO14521 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SDHDO14521 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.81■□□□□ 0.6
SDHDO14521 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.81■□□□□ 0.6
SDHDO14521 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.81■□□□□ 0.6
SDHDO14521 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SDHDO14521 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHDO14521 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SDHDO14521 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHDO14521 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHDO14521 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHDO14521 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.8■□□□□ 0.6
SDHDO14521 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SDHDO14521 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SDHDO14521 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHDO14521 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHDO14521 GPX1P1-201ENST00000388829 606 ntBASIC18.8■□□□□ 0.6
SDHDO14521 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHDO14521 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SDHDO14521 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.8■□□□□ 0.6
SDHDO14521 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.8■□□□□ 0.6
SDHDO14521 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.8■□□□□ 0.6
SDHDO14521 AC231657.2-201ENST00000624556 255 ntBASIC18.8■□□□□ 0.6
SDHDO14521 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHDO14521 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SDHDO14521 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.8■□□□□ 0.6
SDHDO14521 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHDO14521 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SDHDO14521 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SDHDO14521 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHDO14521 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 AC007322.1-201ENST00000426983 750 ntBASIC18.79■□□□□ 0.6
SDHDO14521 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.79■□□□□ 0.6
SDHDO14521 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHDO14521 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHDO14521 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
SDHDO14521 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.79■□□□□ 0.6
SDHDO14521 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SDHDO14521 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SDHDO14521 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.78■□□□□ 0.6
SDHDO14521 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SDHDO14521 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SDHDO14521 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.78■□□□□ 0.6
SDHDO14521 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
SDHDO14521 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SDHDO14521 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.78■□□□□ 0.6
SDHDO14521 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SDHDO14521 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.78■□□□□ 0.6
SDHDO14521 AL512625.2-201ENST00000417533 625 ntBASIC18.78■□□□□ 0.6
SDHDO14521 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.78■□□□□ 0.6
SDHDO14521 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.78■□□□□ 0.6
SDHDO14521 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SDHDO14521 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.78■□□□□ 0.6
SDHDO14521 AL031598.1-201ENST00000561511 1773 ntBASIC18.78■□□□□ 0.6
SDHDO14521 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
SDHDO14521 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SDHDO14521 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SDHDO14521 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SDHDO14521 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms