Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 KRT18P5-201ENST00000436075 1291 ntBASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 BID-214ENST00000617586 542 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV21A0A0B4J279 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 AC087623.3-201ENST00000607047 1098 ntBASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 AC010980.2-201ENST00000587099 1412 ntBASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV21A0A0B4J279 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV21A0A0B4J279 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms