Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 SLC29A4P1-201ENST00000398760 971 ntBASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 RAP2CP1-201ENST00000605103 478 ntBASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 AC018553.1-201ENST00000616682 1458 ntBASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-3A0A0B4J271 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 PKD1P1-201ENST00000458669 6805 ntBASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 DUSP5P2-201ENST00000426873 1033 ntBASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-3A0A0B4J271 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV12-3A0A0B4J271 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV12-3A0A0B4J271 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
TRAV12-3A0A0B4J271 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV12-3A0A0B4J271 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TRAV12-3A0A0B4J271 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV12-3A0A0B4J271 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV12-3A0A0B4J271 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TRAV12-3A0A0B4J271 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV12-3A0A0B4J271 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV12-3A0A0B4J271 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-3A0A0B4J271 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms