Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AL391056.1-201ENST00000443993 2449 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC027141.1-201ENST00000584680 1477 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CD28-202ENST00000374481 4526 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 TROAP-201ENST00000257909 2527 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 RTN3-208ENST00000537981 2532 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC002546.1-201ENST00000588041 2504 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 THUMPD1-202ENST00000396083 2624 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 GUCY1A3-204ENST00000455639 2631 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AGK-203ENST00000473247 1550 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 Z93929.2-201ENST00000615011 2623 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CHAMP1-201ENST00000361283 3795 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 RAD52-202ENST00000358495 2710 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR9-3HG-203ENST00000546186 2718 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NTNG2-201ENST00000372179 3984 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ARHGAP25-202ENST00000409202 2945 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PSTPIP2-204ENST00000589328 2900 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 GUCY1B3-201ENST00000264424 3124 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SEMA4A-201ENST00000355014 3137 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NBR1-206ENST00000590996 3446 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 LRP1-202ENST00000338962 2169 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 HSP90AB2P-201ENST00000507090 2176 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CAMK2G-202ENST00000322635 3720 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 TIGIT-203ENST00000481065 3710 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ZMAT4-202ENST00000315769 2250 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 USP30-203ENST00000392784 2483 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC007938.4-201ENST00000610046 4118 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SRRM1P3-201ENST00000426911 2678 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 TIGIT-201ENST00000383671 2967 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 GOLGA6A-201ENST00000290438 3176 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CYP24A1-201ENST00000216862 3262 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC011008.2-201ENST00000624866 3352 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 YME1L1-207ENST00000477432 3474 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SLU7-201ENST00000297151 3793 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ST3GAL3-210ENST00000361746 1335 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 MRPS18B-206ENST00000259873 1532 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 PGA3-201ENST00000325558 1748 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 P2RX7-202ENST00000328963 5161 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC026333.3-201ENST00000543611 1731 ntTSL 4 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 EVL-214ENST00000555048 1715 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 LPA-203ENST00000614786 1713 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ZSCAN5A-214ENST00000592355 1813 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ICOS-202ENST00000435193 2528 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 TNPO1-213ENST00000523768 2632 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC174-206ENST00000611584 2720 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 GAREM1-201ENST00000269209 3006 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 ARMC8-217ENST00000481646 3043 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 CFAP69-213ENST00000497910 3032 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-4Q9BYR3 AC022905.1-201ENST00000503430 3048 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 248.9 ms