RNA–Protein interactions for RNA: ENST00000638021.1

ARHGEF9-237, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5 BASIC

Gene ARHGEF9, Length 3,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-237ENST00000638021 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
ARHGEF9-237ENST00000638021 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
ARHGEF9-237ENST00000638021 SHROOM4Q9ULL8 1493 aa16.25■□□□□ 0.19
ARHGEF9-237ENST00000638021 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
ARHGEF9-237ENST00000638021 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
ARHGEF9-237ENST00000638021 PCGF6Q9BYE7 350 aa15.43■□□□□ 0.06
ARHGEF9-237ENST00000638021 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF9-237ENST00000638021 CHIC1Q5VXU3 224 aa15.11■□□□□ 0.01
ARHGEF9-237ENST00000638021 LOC105371045A0A1W2PR82 267 aa15.07■□□□□ 0
ARHGEF9-237ENST00000638021 PPARGC1BQ86YN6 1023 aaKnown RBP15.05■□□□□ 0
ARHGEF9-237ENST00000638021 HRCP23327 699 aa15.01□□□□□ -0.01
ARHGEF9-237ENST00000638021 TTBK1Q5TCY1 1321 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF9-237ENST00000638021 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
ARHGEF9-237ENST00000638021 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
ARHGEF9-237ENST00000638021 TRIM26Q12899 539 aaPredicted RBP14.68□□□□□ -0.06
ARHGEF9-237ENST00000638021 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
ARHGEF9-237ENST00000638021 CCER1Q8TC90 406 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF9-237ENST00000638021 RANGAP1P46060 587 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF9-237ENST00000638021 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF9-237ENST00000638021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
ARHGEF9-237ENST00000638021 UBTFP17480 764 aaKnown RBP14.38□□□□□ -0.11
ARHGEF9-237ENST00000638021 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
ARHGEF9-237ENST00000638021 APLP2Q06481 763 aa14.27□□□□□ -0.12
ARHGEF9-237ENST00000638021 ABCC9O60706 1549 aa14.23□□□□□ -0.13
ARHGEF9-237ENST00000638021 DCAF1Q9Y4B6 1507 aa14.21□□□□□ -0.13
ARHGEF9-237ENST00000638021 CENPBP07199 599 aaPredicted RBP14.21□□□□□ -0.14
ARHGEF9-237ENST00000638021 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
ARHGEF9-237ENST00000638021 SCRIBQ14160 1630 aa14.16□□□□□ -0.14
ARHGEF9-237ENST00000638021 CCDC180Q9P1Z9 1646 aa14.16□□□□□ -0.14
ARHGEF9-237ENST00000638021 DIEXFQ68CQ4 756 aaKnown RBP14.1□□□□□ -0.15
ARHGEF9-237ENST00000638021 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
ARHGEF9-237ENST00000638021 PELP1Q8IZL8 1130 aaKnown RBP14.04□□□□□ -0.16
ARHGEF9-237ENST00000638021 RSF1Q96T23 1441 aaPredicted RBP14.02□□□□□ -0.17
ARHGEF9-237ENST00000638021 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
ARHGEF9-237ENST00000638021 AEBP2Q6ZN18 517 aaPredicted RBP14.01□□□□□ -0.17
ARHGEF9-237ENST00000638021 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
ARHGEF9-237ENST00000638021 ITGAEP38570 1179 aa14□□□□□ -0.17
ARHGEF9-237ENST00000638021 ATP1B4Q9UN42 357 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF9-237ENST00000638021 NEUROD1Q13562 356 aa13.91□□□□□ -0.18
ARHGEF9-237ENST00000638021 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.18
ARHGEF9-237ENST00000638021 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.19
ARHGEF9-237ENST00000638021 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
ARHGEF9-237ENST00000638021 RB1CC1Q8TDY2 1594 aa13.82□□□□□ -0.2
ARHGEF9-237ENST00000638021 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF9-237ENST00000638021 MIER1Q8N108 512 aa13.66□□□□□ -0.22
ARHGEF9-237ENST00000638021 MROH2BQ7Z745 1585 aa13.65□□□□□ -0.22
ARHGEF9-237ENST00000638021 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
ARHGEF9-237ENST00000638021 BCANQ96GW7 911 aa13.64□□□□□ -0.23
ARHGEF9-237ENST00000638021 SOGA1O94964 1423 aa13.6□□□□□ -0.23
ARHGEF9-237ENST00000638021 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
ARHGEF9-237ENST00000638021 CNGB1Q14028 1251 aaPredicted RBP13.58□□□□□ -0.24
ARHGEF9-237ENST00000638021 ABCC8Q09428 1581 aa13.57□□□□□ -0.24
ARHGEF9-237ENST00000638021 P3H3Q8IVL6 736 aa13.56□□□□□ -0.24
ARHGEF9-237ENST00000638021 NEFLP07196 543 aa13.54□□□□□ -0.24
ARHGEF9-237ENST00000638021 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
ARHGEF9-237ENST00000638021 WIZO95785 1651 aa13.53□□□□□ -0.24
ARHGEF9-237ENST00000638021 CLIP1P30622 1438 aa13.48□□□□□ -0.25
ARHGEF9-237ENST00000638021 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
ARHGEF9-237ENST00000638021 HIRIP3Q9BW71 556 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF9-237ENST00000638021 NACADO15069 1562 aa13.43□□□□□ -0.26
ARHGEF9-237ENST00000638021 RUSC2Q8N2Y8 1516 aa13.42□□□□□ -0.26
ARHGEF9-237ENST00000638021 POLR3GLQ9BT43 218 aa13.42□□□□□ -0.26
ARHGEF9-237ENST00000638021 WRNQ14191 1432 aaPredicted RBP eCLIP13.42□□□□□ -0.26
ARHGEF9-237ENST00000638021 GOLGA3Q08378 1498 aa13.41□□□□□ -0.26
ARHGEF9-237ENST00000638021 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
ARHGEF9-237ENST00000638021 MYT1Q01538 1121 aa13.39□□□□□ -0.27
ARHGEF9-237ENST00000638021 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
ARHGEF9-237ENST00000638021 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF9-237ENST00000638021 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
ARHGEF9-237ENST00000638021 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
ARHGEF9-237ENST00000638021 FKBP8Q14318 412 aa13.31□□□□□ -0.28
ARHGEF9-237ENST00000638021 EEA1Q15075 1411 aa13.3□□□□□ -0.28
ARHGEF9-237ENST00000638021 KANK4Q5T7N3 995 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF9-237ENST00000638021 CEP164Q9UPV0 1460 aa13.27□□□□□ -0.29
ARHGEF9-237ENST00000638021 ANP32CO43423 234 aa13.27□□□□□ -0.29
ARHGEF9-237ENST00000638021 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
ARHGEF9-237ENST00000638021 IRX6P78412 446 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF9-237ENST00000638021 BAZ1BQ9UIG0 1483 aaKnown RBP13.2□□□□□ -0.3
ARHGEF9-237ENST00000638021 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
ARHGEF9-237ENST00000638021 ZNF326Q5BKZ1 582 aaKnown RBP13.19□□□□□ -0.3
ARHGEF9-237ENST00000638021 VPS8Q8N3P4 1428 aa13.19□□□□□ -0.3
ARHGEF9-237ENST00000638021 CHIC2Q9UKJ5 165 aa13.18□□□□□ -0.3
ARHGEF9-237ENST00000638021 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
ARHGEF9-237ENST00000638021 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
ARHGEF9-237ENST00000638021 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
ARHGEF9-237ENST00000638021 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
ARHGEF9-237ENST00000638021 HNRNPUQ00839 825 aaKnown RBP eCLIP13.14□□□□□ -0.31
ARHGEF9-237ENST00000638021 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
ARHGEF9-237ENST00000638021 SMARCA4P51532 1647 aa13.11□□□□□ -0.31
ARHGEF9-237ENST00000638021 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
ARHGEF9-237ENST00000638021 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.32
ARHGEF9-237ENST00000638021 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
ARHGEF9-237ENST00000638021 RRP7BPQ9NSQ0 103 aa13.07□□□□□ -0.32
ARHGEF9-237ENST00000638021 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
ARHGEF9-237ENST00000638021 DHX57Q6P158 1386 aaKnown RBP13.04□□□□□ -0.32
ARHGEF9-237ENST00000638021 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF9-237ENST00000638021 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF9-237ENST00000638021 RAB3GAP2Q9H2M9 1393 aa13.01□□□□□ -0.33
ARHGEF9-237ENST00000638021 MTUS2Q5JR59 1369 aa13□□□□□ -0.33
ARHGEF9-237ENST00000638021 FBLN2P98095 1184 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms