RNA–Protein interactions for RNA: ENST00000321797.12

LMO7-201, Transcript of LIM domain 7, humanhuman

TSL 5 BASIC

Gene LMO7, Length 5,647 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-201ENST00000321797 NISCHQ9Y2I1 1504 aa16.87■□□□□ 0.29
LMO7-201ENST00000321797 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
LMO7-201ENST00000321797 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
LMO7-201ENST00000321797 MYT1Q01538 1121 aa16.54■□□□□ 0.24
LMO7-201ENST00000321797 CENPBP07199 599 aaPredicted RBP15.36■□□□□ 0.05
LMO7-201ENST00000321797 TTBK1Q5TCY1 1321 aaPredicted RBP15.35■□□□□ 0.05
LMO7-201ENST00000321797 ERICH6Q7L0X2 663 aa15.32■□□□□ 0.04
LMO7-201ENST00000321797 PCGF6Q9BYE7 350 aa15.31■□□□□ 0.04
LMO7-201ENST00000321797 ABCC9O60706 1549 aa15.29■□□□□ 0.04
LMO7-201ENST00000321797 HRCP23327 699 aa15.13■□□□□ 0.01
LMO7-201ENST00000321797 FAM9AQ8IZU1 332 aaPredicted RBP15.07■□□□□ 0
LMO7-201ENST00000321797 PPARGC1BQ86YN6 1023 aaKnown RBP14.94□□□□□ -0.02
LMO7-201ENST00000321797 YTHDC1Q96MU7 727 aaKnown RBP14.94□□□□□ -0.02
LMO7-201ENST00000321797 CCER1Q8TC90 406 aaPredicted RBP14.94□□□□□ -0.02
LMO7-201ENST00000321797 ZEB1P37275 1124 aaPredicted RBP14.9□□□□□ -0.02
LMO7-201ENST00000321797 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
LMO7-201ENST00000321797 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
LMO7-201ENST00000321797 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
LMO7-201ENST00000321797 GTF3C3Q9Y5Q9 886 aa14.71□□□□□ -0.06
LMO7-201ENST00000321797 BCL11AQ9H165 835 aa14.57□□□□□ -0.08
LMO7-201ENST00000321797 NEFLP07196 543 aa14.55□□□□□ -0.08
LMO7-201ENST00000321797 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
LMO7-201ENST00000321797 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
LMO7-201ENST00000321797 CCDC180Q9P1Z9 1646 aa14.5□□□□□ -0.09
LMO7-201ENST00000321797 RB1CC1Q8TDY2 1594 aa14.45□□□□□ -0.1
LMO7-201ENST00000321797 ACIN1Q9UKV3 1341 aaKnown RBP14.45□□□□□ -0.1
LMO7-201ENST00000321797 EIF5BO60841 1220 aaKnown RBP14.42□□□□□ -0.1
LMO7-201ENST00000321797 RTL5Q5HYW3 569 aaPredicted RBP14.38□□□□□ -0.11
LMO7-201ENST00000321797 TRIM26Q12899 539 aaPredicted RBP14.28□□□□□ -0.12
LMO7-201ENST00000321797 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
LMO7-201ENST00000321797 NACADO15069 1562 aa14.22□□□□□ -0.13
LMO7-201ENST00000321797 GLIPR1L2Q4G1C9 344 aa14.21□□□□□ -0.14
LMO7-201ENST00000321797 APLP2Q06481 763 aa14.19□□□□□ -0.14
LMO7-201ENST00000321797 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
LMO7-201ENST00000321797 BCANQ96GW7 911 aa14.18□□□□□ -0.14
LMO7-201ENST00000321797 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
LMO7-201ENST00000321797 NEUROD1Q13562 356 aa14.15□□□□□ -0.14
LMO7-201ENST00000321797 SCRIBQ14160 1630 aa14.11□□□□□ -0.15
LMO7-201ENST00000321797 DAXXQ9UER7 740 aaPredicted RBP14.09□□□□□ -0.15
LMO7-201ENST00000321797 FBLN2P98095 1184 aa14.05□□□□□ -0.16
LMO7-201ENST00000321797 ATP1B4Q9UN42 357 aaPredicted RBP13.99□□□□□ -0.17
LMO7-201ENST00000321797 MYT1LQ9UL68 1186 aa13.97□□□□□ -0.17
LMO7-201ENST00000321797 ERCC6Q03468 1493 aa13.97□□□□□ -0.17
LMO7-201ENST00000321797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
LMO7-201ENST00000321797 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
LMO7-201ENST00000321797 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
LMO7-201ENST00000321797 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
LMO7-201ENST00000321797 CDK11AQ9UQ88 783 aaPredicted RBP13.9□□□□□ -0.18
LMO7-201ENST00000321797 SLC24A1O60721 1099 aa13.89□□□□□ -0.19
LMO7-201ENST00000321797 RANGAP1P46060 587 aaPredicted RBP13.88□□□□□ -0.19
LMO7-201ENST00000321797 NBR1Q14596 966 aa13.87□□□□□ -0.19
LMO7-201ENST00000321797 ZNF316A6NFI3 1004 aaPredicted RBP13.85□□□□□ -0.19
LMO7-201ENST00000321797 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
LMO7-201ENST00000321797 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
LMO7-201ENST00000321797 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
LMO7-201ENST00000321797 UBTFP17480 764 aaKnown RBP13.8□□□□□ -0.2
LMO7-201ENST00000321797 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.75□□□□□ -0.21
LMO7-201ENST00000321797 LOC105371045A0A1W2PR82 267 aa13.74□□□□□ -0.21
LMO7-201ENST00000321797 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
LMO7-201ENST00000321797 CCDC136Q96JN2 1154 aa13.71□□□□□ -0.21
LMO7-201ENST00000321797 CLSPNQ9HAW4 1339 aa13.67□□□□□ -0.22
LMO7-201ENST00000321797 ANP32AP39687 249 aaKnown RBP13.67□□□□□ -0.22
LMO7-201ENST00000321797 FKBP8Q14318 412 aa13.67□□□□□ -0.22
LMO7-201ENST00000321797 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
LMO7-201ENST00000321797 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
LMO7-201ENST00000321797 DEKP35659 375 aaKnown RBP13.62□□□□□ -0.23
LMO7-201ENST00000321797 TRHP20396 242 aaPredicted RBP13.61□□□□□ -0.23
LMO7-201ENST00000321797 DCAF1Q9Y4B6 1507 aa13.61□□□□□ -0.23
LMO7-201ENST00000321797 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
LMO7-201ENST00000321797 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
LMO7-201ENST00000321797 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
LMO7-201ENST00000321797 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
LMO7-201ENST00000321797 PODXL2Q9NZ53 605 aa13.56□□□□□ -0.24
LMO7-201ENST00000321797 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.25
LMO7-201ENST00000321797 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
LMO7-201ENST00000321797 ITGAEP38570 1179 aa13.51□□□□□ -0.25
LMO7-201ENST00000321797 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
LMO7-201ENST00000321797 PKNOX2Q96KN3 472 aa13.49□□□□□ -0.25
LMO7-201ENST00000321797 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
LMO7-201ENST00000321797 AEBP2Q6ZN18 517 aaPredicted RBP13.42□□□□□ -0.26
LMO7-201ENST00000321797 NAP1L5Q96NT1 182 aaPredicted RBP13.42□□□□□ -0.26
LMO7-201ENST00000321797 A0A0U1RQG5 324 aaPredicted RBP13.41□□□□□ -0.26
LMO7-201ENST00000321797 ARXQ96QS3 562 aa13.41□□□□□ -0.26
LMO7-201ENST00000321797 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
LMO7-201ENST00000321797 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
LMO7-201ENST00000321797 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
LMO7-201ENST00000321797 NEFMP07197 916 aa13.4□□□□□ -0.26
LMO7-201ENST00000321797 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
LMO7-201ENST00000321797 MIER1Q8N108 512 aa13.38□□□□□ -0.27
LMO7-201ENST00000321797 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
LMO7-201ENST00000321797 ERICH6BQ5W0A0 696 aa13.37□□□□□ -0.27
LMO7-201ENST00000321797 TNNT2P45379 298 aaPredicted RBP13.36□□□□□ -0.27
LMO7-201ENST00000321797 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
LMO7-201ENST00000321797 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
LMO7-201ENST00000321797 CDK11BP21127 795 aaKnown RBP13.32□□□□□ -0.28
LMO7-201ENST00000321797 RBM19Q9Y4C8 960 aaKnown RBP13.32□□□□□ -0.28
LMO7-201ENST00000321797 SALL2Q9Y467 1007 aaPredicted RBP13.27□□□□□ -0.28
LMO7-201ENST00000321797 NOP58Q9Y2X3 529 aaKnown RBP13.27□□□□□ -0.28
LMO7-201ENST00000321797 ANP32CO43423 234 aa13.26□□□□□ -0.29
LMO7-201ENST00000321797 ANP32BQ92688 251 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms