RNA–Protein interactions for RNA: ENST00000355014.6

SEMA4A-201, Transcript of semaphorin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4A, Length 3,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-201ENST00000355014 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
SEMA4A-201ENST00000355014 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
SEMA4A-201ENST00000355014 SHROOM4Q9ULL8 1493 aa17.74■□□□□ 0.43
SEMA4A-201ENST00000355014 PELP1Q8IZL8 1130 aaKnown RBP17.64■□□□□ 0.41
SEMA4A-201ENST00000355014 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
SEMA4A-201ENST00000355014 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
SEMA4A-201ENST00000355014 MYT1Q01538 1121 aa17.38■□□□□ 0.37
SEMA4A-201ENST00000355014 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
SEMA4A-201ENST00000355014 HRCP23327 699 aa17.3■□□□□ 0.36
SEMA4A-201ENST00000355014 ABCC9O60706 1549 aa17.24■□□□□ 0.35
SEMA4A-201ENST00000355014 PCGF6Q9BYE7 350 aa17.22■□□□□ 0.35
SEMA4A-201ENST00000355014 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
SEMA4A-201ENST00000355014 MYO15BQ96JP2 1530 aa17.19■□□□□ 0.34
SEMA4A-201ENST00000355014 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.34
SEMA4A-201ENST00000355014 DCAF1Q9Y4B6 1507 aa16.91■□□□□ 0.3
SEMA4A-201ENST00000355014 LOC105371045A0A1W2PR82 267 aa16.82■□□□□ 0.28
SEMA4A-201ENST00000355014 SCRIBQ14160 1630 aa16.73■□□□□ 0.27
SEMA4A-201ENST00000355014 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
SEMA4A-201ENST00000355014 NACADO15069 1562 aa16.67■□□□□ 0.26
SEMA4A-201ENST00000355014 PRKCSHP14314 528 aaPredicted RBP16.62■□□□□ 0.25
SEMA4A-201ENST00000355014 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
SEMA4A-201ENST00000355014 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
SEMA4A-201ENST00000355014 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
SEMA4A-201ENST00000355014 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
SEMA4A-201ENST00000355014 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
SEMA4A-201ENST00000355014 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
SEMA4A-201ENST00000355014 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.2
SEMA4A-201ENST00000355014 UNC13AQ9UPW8 1703 aa16.27■□□□□ 0.19
SEMA4A-201ENST00000355014 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
SEMA4A-201ENST00000355014 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
SEMA4A-201ENST00000355014 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
SEMA4A-201ENST00000355014 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
SEMA4A-201ENST00000355014 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
SEMA4A-201ENST00000355014 APLP2Q06481 763 aa16.12■□□□□ 0.17
SEMA4A-201ENST00000355014 BICRAQ9NZM4 1560 aa16.11■□□□□ 0.17
SEMA4A-201ENST00000355014 MROH2BQ7Z745 1585 aa16.1■□□□□ 0.17
SEMA4A-201ENST00000355014 BCL11AQ9H165 835 aa16.1■□□□□ 0.17
SEMA4A-201ENST00000355014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
SEMA4A-201ENST00000355014 NEUROD1Q13562 356 aa16.01■□□□□ 0.15
SEMA4A-201ENST00000355014 WIZO95785 1651 aa15.98■□□□□ 0.15
SEMA4A-201ENST00000355014 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
SEMA4A-201ENST00000355014 ACIN1Q9UKV3 1341 aaKnown RBP15.94■□□□□ 0.14
SEMA4A-201ENST00000355014 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
SEMA4A-201ENST00000355014 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
SEMA4A-201ENST00000355014 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
SEMA4A-201ENST00000355014 DIEXFQ68CQ4 756 aaKnown RBP15.82■□□□□ 0.12
SEMA4A-201ENST00000355014 CENPBP07199 599 aaPredicted RBP15.76■□□□□ 0.11
SEMA4A-201ENST00000355014 YTHDC1Q96MU7 727 aaKnown RBP15.75■□□□□ 0.11
SEMA4A-201ENST00000355014 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
SEMA4A-201ENST00000355014 ATAD2BQ9ULI0 1458 aa15.67■□□□□ 0.1
SEMA4A-201ENST00000355014 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
SEMA4A-201ENST00000355014 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
SEMA4A-201ENST00000355014 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
SEMA4A-201ENST00000355014 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
SEMA4A-201ENST00000355014 SMARCA2P51531 1590 aa15.58■□□□□ 0.09
SEMA4A-201ENST00000355014 CEP162Q5TB80 1403 aa15.56■□□□□ 0.08
SEMA4A-201ENST00000355014 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
SEMA4A-201ENST00000355014 ZNF316A6NFI3 1004 aaPredicted RBP15.54■□□□□ 0.08
SEMA4A-201ENST00000355014 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
SEMA4A-201ENST00000355014 TNIKQ9UKE5 1360 aa15.51■□□□□ 0.07
SEMA4A-201ENST00000355014 DAXXQ9UER7 740 aaPredicted RBP15.48■□□□□ 0.07
SEMA4A-201ENST00000355014 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
SEMA4A-201ENST00000355014 MIER1Q8N108 512 aa15.48■□□□□ 0.07
SEMA4A-201ENST00000355014 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
SEMA4A-201ENST00000355014 SOGA1O94964 1423 aa15.45■□□□□ 0.06
SEMA4A-201ENST00000355014 UBTFP17480 764 aaKnown RBP15.45■□□□□ 0.06
SEMA4A-201ENST00000355014 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
SEMA4A-201ENST00000355014 CSRNP3Q8WYN3 585 aa15.43■□□□□ 0.06
SEMA4A-201ENST00000355014 EEA1Q15075 1411 aa15.43■□□□□ 0.06
SEMA4A-201ENST00000355014 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
SEMA4A-201ENST00000355014 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
SEMA4A-201ENST00000355014 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
SEMA4A-201ENST00000355014 GOLGA3Q08378 1498 aa15.35■□□□□ 0.05
SEMA4A-201ENST00000355014 EIF5BO60841 1220 aaKnown RBP15.31■□□□□ 0.04
SEMA4A-201ENST00000355014 RANGAP1P46060 587 aaPredicted RBP15.29■□□□□ 0.04
SEMA4A-201ENST00000355014 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
SEMA4A-201ENST00000355014 CLIP1P30622 1438 aa15.2■□□□□ 0.02
SEMA4A-201ENST00000355014 KIF21BO75037 1637 aa15.18■□□□□ 0.02
SEMA4A-201ENST00000355014 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
SEMA4A-201ENST00000355014 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
SEMA4A-201ENST00000355014 CFTRP13569 1480 aa15.15■□□□□ 0.02
SEMA4A-201ENST00000355014 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
SEMA4A-201ENST00000355014 NESP48681 1621 aa15.14■□□□□ 0.01
SEMA4A-201ENST00000355014 ANP32EQ9BTT0 268 aa15.13■□□□□ 0.01
SEMA4A-201ENST00000355014 SUPT16HQ9Y5B9 1047 aaKnown RBP15.12■□□□□ 0.01
SEMA4A-201ENST00000355014 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
SEMA4A-201ENST00000355014 PLEKHG5O94827 1062 aa15.1■□□□□ 0.01
SEMA4A-201ENST00000355014 RAPGEF2Q9Y4G8 1499 aa15.05■□□□□ 0
SEMA4A-201ENST00000355014 BCANQ96GW7 911 aa15.03■□□□□ -0
SEMA4A-201ENST00000355014 DHX57Q6P158 1386 aaKnown RBP15.02■□□□□ -0
SEMA4A-201ENST00000355014 CUX1P39880 1505 aa15.02□□□□□ -0.01
SEMA4A-201ENST00000355014 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
SEMA4A-201ENST00000355014 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
SEMA4A-201ENST00000355014 KCNH8Q96L42 1107 aa15□□□□□ -0.01
SEMA4A-201ENST00000355014 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
SEMA4A-201ENST00000355014 TOP2BQ02880 1626 aa14.98□□□□□ -0.01
SEMA4A-201ENST00000355014 ITGAEP38570 1179 aa14.93□□□□□ -0.02
SEMA4A-201ENST00000355014 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
SEMA4A-201ENST00000355014 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
SEMA4A-201ENST00000355014 KANK4Q5T7N3 995 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms