RNA–Protein interactions for RNA: ENST00000588041.1

AC002546.1-201, humanhuman

BASIC

Gene AC002546.1, Length 2,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002546.1-201ENST00000588041 AEBP2Q6ZN18 517 aaPredicted RBP9.53□□□□□ -0.88
AC002546.1-201ENST00000588041 CHIC1Q5VXU3 224 aa8.98□□□□□ -0.97
AC002546.1-201ENST00000588041 POTEDQ86YR6 584 aa8.79□□□□□ -1
AC002546.1-201ENST00000588041 SENP3Q9H4L4 574 aaPredicted RBP8.28□□□□□ -1.08
AC002546.1-201ENST00000588041 PHF23Q9BUL5 403 aaPredicted RBP8.07□□□□□ -1.12
AC002546.1-201ENST00000588041 FOXD1Q16676 465 aa7.74□□□□□ -1.17
AC002546.1-201ENST00000588041 SLC24A1O60721 1099 aa7.69□□□□□ -1.18
AC002546.1-201ENST00000588041 EHMT2Q96KQ7 1210 aa7.64□□□□□ -1.19
AC002546.1-201ENST00000588041 MSH5O43196 834 aa7.63□□□□□ -1.19
AC002546.1-201ENST00000588041 PLPPR3Q6T4P5 718 aa7.35□□□□□ -1.23
AC002546.1-201ENST00000588041 RTN4Q9NQC3 1192 aaKnown RBP7.2□□□□□ -1.26
AC002546.1-201ENST00000588041 PIAS4Q8N2W9 510 aaPredicted RBP7.14□□□□□ -1.27
AC002546.1-201ENST00000588041 KCNA4P22459 653 aa7.12□□□□□ -1.27
AC002546.1-201ENST00000588041 CSRNP3Q8WYN3 585 aa7.11□□□□□ -1.27
AC002546.1-201ENST00000588041 CACNB1Q02641 598 aaPredicted RBP6.94□□□□□ -1.3
AC002546.1-201ENST00000588041 AMER1Q5JTC6 1135 aaPredicted RBP6.9□□□□□ -1.3
AC002546.1-201ENST00000588041 PRKCSHP14314 528 aaPredicted RBP6.85□□□□□ -1.31
AC002546.1-201ENST00000588041 NCBP3Q53F19 620 aaKnown RBP6.84□□□□□ -1.31
AC002546.1-201ENST00000588041 PPP6R1Q9UPN7 881 aa6.82□□□□□ -1.32
AC002546.1-201ENST00000588041 ADRA2BP18089 450 aa6.79□□□□□ -1.32
AC002546.1-201ENST00000588041 SLC4A1APQ9BWU0 796 aaKnown RBP6.78□□□□□ -1.32
AC002546.1-201ENST00000588041 POTEHQ6S545 545 aa6.73□□□□□ -1.33
AC002546.1-201ENST00000588041 DAXXQ9UER7 740 aaPredicted RBP6.73□□□□□ -1.33
AC002546.1-201ENST00000588041 ZBTB22O15209 634 aa6.63□□□□□ -1.35
AC002546.1-201ENST00000588041 TIMELESSQ9UNS1 1208 aa6.59□□□□□ -1.35
AC002546.1-201ENST00000588041 TAOK2Q9UL54 1235 aa6.55□□□□□ -1.36
AC002546.1-201ENST00000588041 TULP1O00294 542 aaPredicted RBP6.49□□□□□ -1.37
AC002546.1-201ENST00000588041 TPRNQ4KMQ1 711 aa6.47□□□□□ -1.37
AC002546.1-201ENST00000588041 DMRT2Q9Y5R5 561 aa6.47□□□□□ -1.37
AC002546.1-201ENST00000588041 PLCB2Q00722 1185 aa6.43□□□□□ -1.38
AC002546.1-201ENST00000588041 BCANQ96GW7 911 aa6.43□□□□□ -1.38
AC002546.1-201ENST00000588041 ARXQ96QS3 562 aa6.42□□□□□ -1.38
AC002546.1-201ENST00000588041 NPM3O75607 178 aaKnown RBP6.39□□□□□ -1.39
AC002546.1-201ENST00000588041 HAP1P54257 671 aaPredicted RBP6.39□□□□□ -1.39
AC002546.1-201ENST00000588041 MAPK8IP2Q13387 824 aaPredicted RBP6.38□□□□□ -1.39
AC002546.1-201ENST00000588041 FKBP8Q14318 412 aa6.37□□□□□ -1.39
AC002546.1-201ENST00000588041 RNF39Q9H2S5 420 aa6.33□□□□□ -1.4
AC002546.1-201ENST00000588041 C1QBPQ07021 282 aaKnown RBP6.3□□□□□ -1.4
AC002546.1-201ENST00000588041 SCAF1Q9H7N4 1312 aaKnown RBP6.29□□□□□ -1.4
AC002546.1-201ENST00000588041 PPP4R3CPQ6ZMV5 832 aa6.29□□□□□ -1.4
AC002546.1-201ENST00000588041 DCAF8L1A6NGE4 600 aa6.27□□□□□ -1.41
AC002546.1-201ENST00000588041 GTF3C3Q9Y5Q9 886 aa6.27□□□□□ -1.41
AC002546.1-201ENST00000588041 HOMEZQ8IX15 550 aa6.26□□□□□ -1.41
AC002546.1-201ENST00000588041 KDM2AQ9Y2K7 1162 aa6.24□□□□□ -1.41
AC002546.1-201ENST00000588041 FBLN2P98095 1184 aa6.22□□□□□ -1.41
AC002546.1-201ENST00000588041 KLHL34Q8N239 644 aa6.21□□□□□ -1.42
AC002546.1-201ENST00000588041 PODXL2Q9NZ53 605 aa6.21□□□□□ -1.42
AC002546.1-201ENST00000588041 DCAF8L2P0C7V8 631 aa6.16□□□□□ -1.42
AC002546.1-201ENST00000588041 RANGAP1P46060 587 aaPredicted RBP6.16□□□□□ -1.42
AC002546.1-201ENST00000588041 VSIG10Q8N0Z9 540 aa6.15□□□□□ -1.42
AC002546.1-201ENST00000588041 FOXD4L1Q9NU39 408 aa6.15□□□□□ -1.42
AC002546.1-201ENST00000588041 APLP2Q06481 763 aa6.13□□□□□ -1.43
AC002546.1-201ENST00000588041 TMEM132AQ24JP5 1023 aa6.12□□□□□ -1.43
AC002546.1-201ENST00000588041 SUPT5HO00267 1087 aaKnown RBP6.07□□□□□ -1.44
AC002546.1-201ENST00000588041 C14orf37Q86TY3 774 aa6.07□□□□□ -1.44
AC002546.1-201ENST00000588041 HOXD11P31277 338 aaPredicted RBP6.02□□□□□ -1.45
AC002546.1-201ENST00000588041 TRIM26Q12899 539 aaPredicted RBP6.01□□□□□ -1.45
AC002546.1-201ENST00000588041 NPM2Q86SE8 214 aaKnown RBP6.01□□□□□ -1.45
AC002546.1-201ENST00000588041 UBTFP17480 764 aaKnown RBP5.99□□□□□ -1.45
AC002546.1-201ENST00000588041 CFAP44Q96MT7 982 aa5.97□□□□□ -1.45
AC002546.1-201ENST00000588041 PAXIP1Q6ZW49 1069 aaPredicted RBP5.97□□□□□ -1.45
AC002546.1-201ENST00000588041 DNAJC5BQ9UF47 199 aa5.96□□□□□ -1.45
AC002546.1-201ENST00000588041 TSHZ2Q9NRE2 1034 aa5.95□□□□□ -1.46
AC002546.1-201ENST00000588041 HRCP23327 699 aa5.95□□□□□ -1.46
AC002546.1-201ENST00000588041 PELP1Q8IZL8 1130 aaKnown RBP5.94□□□□□ -1.46
AC002546.1-201ENST00000588041 ERICH6Q7L0X2 663 aa5.94□□□□□ -1.46
AC002546.1-201ENST00000588041 NPM1P06748 294 aaKnown RBP eCLIP5.93□□□□□ -1.46
AC002546.1-201ENST00000588041 PLSCR2Q9NRY7 297 aa5.92□□□□□ -1.46
AC002546.1-201ENST00000588041 PKD2Q13563 968 aa5.91□□□□□ -1.46
AC002546.1-201ENST00000588041 PLEKHG5O94827 1062 aa5.89□□□□□ -1.47
AC002546.1-201ENST00000588041 SP7Q8TDD2 431 aaPredicted RBP5.88□□□□□ -1.47
AC002546.1-201ENST00000588041 NBR1Q14596 966 aa5.87□□□□□ -1.47
AC002546.1-201ENST00000588041 RNF216Q9NWF9 866 aaPredicted RBP5.86□□□□□ -1.47
AC002546.1-201ENST00000588041 LOC105371045A0A1W2PR82 267 aa5.85□□□□□ -1.47
AC002546.1-201ENST00000588041 CNKSR2Q8WXI2 1034 aa5.85□□□□□ -1.47
AC002546.1-201ENST00000588041 TTBK1Q5TCY1 1321 aaPredicted RBP5.85□□□□□ -1.47
AC002546.1-201ENST00000588041 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.84□□□□□ -1.47
AC002546.1-201ENST00000588041 TRHP20396 242 aaPredicted RBP5.84□□□□□ -1.47
AC002546.1-201ENST00000588041 IFNLR1Q8IU57 520 aaPredicted RBP5.84□□□□□ -1.47
AC002546.1-201ENST00000588041 SLC4A2P04920 1241 aa5.81□□□□□ -1.48
AC002546.1-201ENST00000588041 BBXQ8WY36 941 aaPredicted RBP5.81□□□□□ -1.48
AC002546.1-201ENST00000588041 FBXO3Q9UK99 471 aa5.81□□□□□ -1.48
AC002546.1-201ENST00000588041 EIF5BO60841 1220 aaKnown RBP5.81□□□□□ -1.48
AC002546.1-201ENST00000588041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.78□□□□□ -1.48
AC002546.1-201ENST00000588041 MYT1Q01538 1121 aa5.76□□□□□ -1.49
AC002546.1-201ENST00000588041 VASPP50552 380 aaPredicted RBP5.76□□□□□ -1.49
AC002546.1-201ENST00000588041 SPRYD3Q8NCJ5 442 aa5.76□□□□□ -1.49
AC002546.1-201ENST00000588041 ARID3AQ99856 593 aa5.75□□□□□ -1.49
AC002546.1-201ENST00000588041 DSG3P32926 999 aa5.73□□□□□ -1.49
AC002546.1-201ENST00000588041 ATF5Q9Y2D1 282 aaPredicted RBP5.73□□□□□ -1.49
AC002546.1-201ENST00000588041 ATXN8OSP0DMR3 200 aa5.72□□□□□ -1.49
AC002546.1-201ENST00000588041 BRPF1P55201 1214 aaPredicted RBP5.71□□□□□ -1.5
AC002546.1-201ENST00000588041 RGL2O15211 777 aa5.7□□□□□ -1.5
AC002546.1-201ENST00000588041 CAPN15O75808 1086 aa5.69□□□□□ -1.5
AC002546.1-201ENST00000588041 DNAJC5Q9H3Z4 198 aa5.69□□□□□ -1.5
AC002546.1-201ENST00000588041 IGSF3O75054 1194 aa5.67□□□□□ -1.5
AC002546.1-201ENST00000588041 ECM2O94769 699 aaPredicted RBP5.67□□□□□ -1.5
AC002546.1-201ENST00000588041 MYCNP04198 464 aaPredicted RBP5.65□□□□□ -1.5
AC002546.1-201ENST00000588041 NECTIN2Q92692 538 aa5.65□□□□□ -1.5
AC002546.1-201ENST00000588041 C1orf115Q9H7X2 142 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms