RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.41
TNPO1-213ENST00000523768 CCDC180Q9P1Z9 1646 aa20.43■□□□□ 0.86
TNPO1-213ENST00000523768 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
TNPO1-213ENST00000523768 SHROOM4Q9ULL8 1493 aa20.06■□□□□ 0.8
TNPO1-213ENST00000523768 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
TNPO1-213ENST00000523768 SUPT5HO00267 1087 aaKnown RBP19.64■□□□□ 0.73
TNPO1-213ENST00000523768 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.73
TNPO1-213ENST00000523768 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
TNPO1-213ENST00000523768 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
TNPO1-213ENST00000523768 ABCC9O60706 1549 aa19.03■□□□□ 0.64
TNPO1-213ENST00000523768 SCRIBQ14160 1630 aa18.97■□□□□ 0.63
TNPO1-213ENST00000523768 NACADO15069 1562 aa18.9■□□□□ 0.62
TNPO1-213ENST00000523768 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
TNPO1-213ENST00000523768 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
TNPO1-213ENST00000523768 CECR2Q9BXF3 1484 aa18.56■□□□□ 0.56
TNPO1-213ENST00000523768 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
TNPO1-213ENST00000523768 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
TNPO1-213ENST00000523768 HRCP23327 699 aa18.4■□□□□ 0.54
TNPO1-213ENST00000523768 WIZO95785 1651 aa18.39■□□□□ 0.53
TNPO1-213ENST00000523768 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
TNPO1-213ENST00000523768 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
TNPO1-213ENST00000523768 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
TNPO1-213ENST00000523768 UNC13AQ9UPW8 1703 aa18.25■□□□□ 0.51
TNPO1-213ENST00000523768 SMARCA4P51532 1647 aa18.21■□□□□ 0.5
TNPO1-213ENST00000523768 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
TNPO1-213ENST00000523768 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
TNPO1-213ENST00000523768 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
TNPO1-213ENST00000523768 FAM9AQ8IZU1 332 aaPredicted RBP18.11■□□□□ 0.49
TNPO1-213ENST00000523768 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
TNPO1-213ENST00000523768 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
TNPO1-213ENST00000523768 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
TNPO1-213ENST00000523768 PEG3Q9GZU2 1588 aa17.94■□□□□ 0.46
TNPO1-213ENST00000523768 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
TNPO1-213ENST00000523768 ABCC8Q09428 1581 aa17.9■□□□□ 0.46
TNPO1-213ENST00000523768 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
TNPO1-213ENST00000523768 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
TNPO1-213ENST00000523768 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.44
TNPO1-213ENST00000523768 EEA1Q15075 1411 aa17.77■□□□□ 0.44
TNPO1-213ENST00000523768 ATAD2BQ9ULI0 1458 aa17.76■□□□□ 0.43
TNPO1-213ENST00000523768 SOGA1O94964 1423 aa17.73■□□□□ 0.43
TNPO1-213ENST00000523768 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
TNPO1-213ENST00000523768 BAZ1BQ9UIG0 1483 aaKnown RBP17.68■□□□□ 0.42
TNPO1-213ENST00000523768 TNIKQ9UKE5 1360 aa17.67■□□□□ 0.42
TNPO1-213ENST00000523768 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
TNPO1-213ENST00000523768 CEP162Q5TB80 1403 aa17.64■□□□□ 0.41
TNPO1-213ENST00000523768 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
TNPO1-213ENST00000523768 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
TNPO1-213ENST00000523768 GOLGA3Q08378 1498 aa17.58■□□□□ 0.4
TNPO1-213ENST00000523768 UBTFP17480 764 aaKnown RBP17.5■□□□□ 0.39
TNPO1-213ENST00000523768 KIF21BO75037 1637 aa17.5■□□□□ 0.39
TNPO1-213ENST00000523768 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
TNPO1-213ENST00000523768 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
TNPO1-213ENST00000523768 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
TNPO1-213ENST00000523768 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
TNPO1-213ENST00000523768 BIVM-ERCC5R4GMW8 1640 aa17.4■□□□□ 0.38
TNPO1-213ENST00000523768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
TNPO1-213ENST00000523768 CLIP1P30622 1438 aa17.34■□□□□ 0.37
TNPO1-213ENST00000523768 CCER1Q8TC90 406 aaPredicted RBP17.33■□□□□ 0.36
TNPO1-213ENST00000523768 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
TNPO1-213ENST00000523768 CFTRP13569 1480 aa17.29■□□□□ 0.36
TNPO1-213ENST00000523768 VPS8Q8N3P4 1428 aa17.28■□□□□ 0.36
TNPO1-213ENST00000523768 TTBK1Q5TCY1 1321 aaPredicted RBP17.27■□□□□ 0.36
TNPO1-213ENST00000523768 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
TNPO1-213ENST00000523768 CUX1P39880 1505 aa17.25■□□□□ 0.35
TNPO1-213ENST00000523768 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
TNPO1-213ENST00000523768 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
TNPO1-213ENST00000523768 KIF27Q86VH2 1401 aa17.17■□□□□ 0.34
TNPO1-213ENST00000523768 APLP2Q06481 763 aa17.12■□□□□ 0.33
TNPO1-213ENST00000523768 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
TNPO1-213ENST00000523768 ARAP1Q96P48 1450 aa17.08■□□□□ 0.32
TNPO1-213ENST00000523768 RANGAP1P46060 587 aaPredicted RBP17.04■□□□□ 0.32
TNPO1-213ENST00000523768 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
TNPO1-213ENST00000523768 CC2D2AQ9P2K1 1620 aa17■□□□□ 0.31
TNPO1-213ENST00000523768 IGF1RP08069 1367 aa16.98■□□□□ 0.31
TNPO1-213ENST00000523768 CUX2O14529 1486 aa16.98■□□□□ 0.31
TNPO1-213ENST00000523768 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
TNPO1-213ENST00000523768 DIEXFQ68CQ4 756 aaKnown RBP16.95■□□□□ 0.3
TNPO1-213ENST00000523768 FGD5Q6ZNL6 1462 aa16.95■□□□□ 0.3
TNPO1-213ENST00000523768 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
TNPO1-213ENST00000523768 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
TNPO1-213ENST00000523768 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
TNPO1-213ENST00000523768 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
TNPO1-213ENST00000523768 RRBP1Q9P2E9 1410 aaKnown RBP16.88■□□□□ 0.29
TNPO1-213ENST00000523768 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
TNPO1-213ENST00000523768 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
TNPO1-213ENST00000523768 MAP3K1Q13233 1512 aa16.84■□□□□ 0.29
TNPO1-213ENST00000523768 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
TNPO1-213ENST00000523768 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
TNPO1-213ENST00000523768 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
TNPO1-213ENST00000523768 DHX57Q6P158 1386 aaKnown RBP16.78■□□□□ 0.28
TNPO1-213ENST00000523768 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
TNPO1-213ENST00000523768 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
TNPO1-213ENST00000523768 TIAM1Q13009 1591 aa16.77■□□□□ 0.28
TNPO1-213ENST00000523768 ACIN1Q9UKV3 1341 aaKnown RBP16.76■□□□□ 0.27
TNPO1-213ENST00000523768 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
TNPO1-213ENST00000523768 NESP48681 1621 aa16.75■□□□□ 0.27
TNPO1-213ENST00000523768 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
TNPO1-213ENST00000523768 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
TNPO1-213ENST00000523768 CUL7Q14999 1698 aa16.72■□□□□ 0.27
TNPO1-213ENST00000523768 LRRC9Q6ZRR7 1453 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms