Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GOLGA2P5-202ENST00000304813 3105 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 APPL2-202ENST00000539978 2680 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CEP57L1-205ENST00000517392 2771 ntAPPRIS P3 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GALNTL6-204ENST00000508122 1755 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GULP1-201ENST00000359135 3347 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF419-206ENST00000426954 2319 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PPP4R1L-207ENST00000493688 2325 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC116096.1-201ENST00000566804 2314 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AL353616.1-201ENST00000436315 2860 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CPHL1P-201ENST00000461341 3407 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 KXD1-216ENST00000601630 1327 ntTSL 3 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC012613.2-201ENST00000523176 4533 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC008060.4-201ENST00000569431 1861 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC002480.2-201ENST00000435127 2432 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NELL1-202ENST00000325319 3094 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 BIN2-202ENST00000544402 1990 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 TADA2A-205ENST00000615182 4253 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC00485-201ENST00000547179 3722 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 RPE-201ENST00000354506 3165 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 STRIP1-201ENST00000369795 3265 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC010266.2-201ENST00000564741 3255 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 BRAFP1-201ENST00000445336 2703 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ZP2-203ENST00000574002 2749 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 KLF8-204ENST00000468660 1543 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 IL4R-201ENST00000170630 3380 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 VIT-204ENST00000401530 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NLRP12-205ENST00000391775 3465 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 INPP4A-210ENST00000523221 2934 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 PSMA3-AS1-214ENST00000557660 2360 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 DGKG-201ENST00000265022 5805 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ANGEL2-202ENST00000366962 4649 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 POP1-202ENST00000401707 4719 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 FOXO3-203ENST00000540898 2553 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ZSCAN25-202ENST00000334715 4079 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 Z97200.1-201ENST00000606154 2045 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC38A7-206ENST00000564100 2867 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 C11orf42-201ENST00000316375 1142 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SMIM23-201ENST00000330910 468 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 DMRTC1B-201ENST00000334036 1197 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ENSA-202ENST00000339643 633 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SAA1-201ENST00000356524 615 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 ACEA_U3.1-201ENST00000363057 217 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SKP45-201ENST00000363509 304 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SNORD45.3-201ENST00000363836 72 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-487P-201ENST00000365430 104 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 CA5BP1-203ENST00000380334 1264 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.92□□□□□ -2.1
KRTAP4-4Q9BYR3 SNORD116-23-201ENST00000384645 92 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms