RNA–Protein interactions for RNA: ENST00000303052.12

CSNK1G1-201, Transcript of casein kinase 1 gamma 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CSNK1G1, Length 8,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1-201ENST00000303052 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
CSNK1G1-201ENST00000303052 SUPT5HO00267 1087 aaKnown RBP15.53■□□□□ 0.08
CSNK1G1-201ENST00000303052 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
CSNK1G1-201ENST00000303052 SHROOM4Q9ULL8 1493 aa15.15■□□□□ 0.02
CSNK1G1-201ENST00000303052 NISCHQ9Y2I1 1504 aa15.11■□□□□ 0.01
CSNK1G1-201ENST00000303052 PCGF6Q9BYE7 350 aa15.08■□□□□ 0
CSNK1G1-201ENST00000303052 MYT1Q01538 1121 aa15.04■□□□□ -0
CSNK1G1-201ENST00000303052 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
CSNK1G1-201ENST00000303052 CENPBP07199 599 aaPredicted RBP14.93□□□□□ -0.02
CSNK1G1-201ENST00000303052 ZEB1P37275 1124 aaPredicted RBP14.84□□□□□ -0.03
CSNK1G1-201ENST00000303052 ERICH6Q7L0X2 663 aa14.78□□□□□ -0.04
CSNK1G1-201ENST00000303052 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.07
CSNK1G1-201ENST00000303052 TTBK1Q5TCY1 1321 aaPredicted RBP14.64□□□□□ -0.07
CSNK1G1-201ENST00000303052 HRCP23327 699 aa14.64□□□□□ -0.07
CSNK1G1-201ENST00000303052 APLP2Q06481 763 aa14.61□□□□□ -0.07
CSNK1G1-201ENST00000303052 CCER1Q8TC90 406 aaPredicted RBP14.6□□□□□ -0.07
CSNK1G1-201ENST00000303052 YTHDC1Q96MU7 727 aaKnown RBP14.59□□□□□ -0.07
CSNK1G1-201ENST00000303052 NEFLP07196 543 aa14.38□□□□□ -0.11
CSNK1G1-201ENST00000303052 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
CSNK1G1-201ENST00000303052 PPARGC1BQ86YN6 1023 aaKnown RBP14.37□□□□□ -0.11
CSNK1G1-201ENST00000303052 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
CSNK1G1-201ENST00000303052 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
CSNK1G1-201ENST00000303052 UBTFP17480 764 aaKnown RBP14.05□□□□□ -0.16
CSNK1G1-201ENST00000303052 LOC105371045A0A1W2PR82 267 aa14.04□□□□□ -0.16
CSNK1G1-201ENST00000303052 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.16
CSNK1G1-201ENST00000303052 CHIC1Q5VXU3 224 aa14.01□□□□□ -0.17
CSNK1G1-201ENST00000303052 DIEXFQ68CQ4 756 aaKnown RBP14.01□□□□□ -0.17
CSNK1G1-201ENST00000303052 ATP1B4Q9UN42 357 aaPredicted RBP13.93□□□□□ -0.18
CSNK1G1-201ENST00000303052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.9□□□□□ -0.18
CSNK1G1-201ENST00000303052 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
CSNK1G1-201ENST00000303052 RTL5Q5HYW3 569 aaPredicted RBP13.86□□□□□ -0.19
CSNK1G1-201ENST00000303052 ACIN1Q9UKV3 1341 aaKnown RBP13.85□□□□□ -0.19
CSNK1G1-201ENST00000303052 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
CSNK1G1-201ENST00000303052 BCANQ96GW7 911 aa13.8□□□□□ -0.2
CSNK1G1-201ENST00000303052 ITGAEP38570 1179 aa13.73□□□□□ -0.21
CSNK1G1-201ENST00000303052 POLR3GLQ9BT43 218 aa13.66□□□□□ -0.22
CSNK1G1-201ENST00000303052 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
CSNK1G1-201ENST00000303052 CDK11AQ9UQ88 783 aaPredicted RBP13.61□□□□□ -0.23
CSNK1G1-201ENST00000303052 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
CSNK1G1-201ENST00000303052 CNGB1Q14028 1251 aaPredicted RBP13.6□□□□□ -0.23
CSNK1G1-201ENST00000303052 NEUROD1Q13562 356 aa13.5□□□□□ -0.25
CSNK1G1-201ENST00000303052 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
CSNK1G1-201ENST00000303052 ANP32CO43423 234 aa13.46□□□□□ -0.26
CSNK1G1-201ENST00000303052 FKBP8Q14318 412 aa13.38□□□□□ -0.27
CSNK1G1-201ENST00000303052 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
CSNK1G1-201ENST00000303052 EIF5BO60841 1220 aaKnown RBP13.36□□□□□ -0.27
CSNK1G1-201ENST00000303052 DCAF1Q9Y4B6 1507 aa13.33□□□□□ -0.28
CSNK1G1-201ENST00000303052 FAM50AQ14320 339 aaKnown RBP13.33□□□□□ -0.28
CSNK1G1-201ENST00000303052 MYT1LQ9UL68 1186 aa13.32□□□□□ -0.28
CSNK1G1-201ENST00000303052 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
CSNK1G1-201ENST00000303052 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
CSNK1G1-201ENST00000303052 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
CSNK1G1-201ENST00000303052 NBR1Q14596 966 aa13.22□□□□□ -0.29
CSNK1G1-201ENST00000303052 GLIPR1L2Q4G1C9 344 aa13.19□□□□□ -0.3
CSNK1G1-201ENST00000303052 MIER1Q8N108 512 aa13.17□□□□□ -0.3
CSNK1G1-201ENST00000303052 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
CSNK1G1-201ENST00000303052 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
CSNK1G1-201ENST00000303052 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
CSNK1G1-201ENST00000303052 HNRNPUQ00839 825 aaKnown RBP eCLIP13.1□□□□□ -0.31
CSNK1G1-201ENST00000303052 CANXP27824 592 aaKnown RBP13.09□□□□□ -0.31
CSNK1G1-201ENST00000303052 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
CSNK1G1-201ENST00000303052 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
CSNK1G1-201ENST00000303052 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.32
CSNK1G1-201ENST00000303052 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.33
CSNK1G1-201ENST00000303052 FAM9BQ8IZU0 186 aa13.01□□□□□ -0.33
CSNK1G1-201ENST00000303052 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
CSNK1G1-201ENST00000303052 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
CSNK1G1-201ENST00000303052 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
CSNK1G1-201ENST00000303052 ARXQ96QS3 562 aa12.94□□□□□ -0.34
CSNK1G1-201ENST00000303052 SUPT16HQ9Y5B9 1047 aaKnown RBP12.93□□□□□ -0.34
CSNK1G1-201ENST00000303052 TONSLQ96HA7 1378 aa12.93□□□□□ -0.34
CSNK1G1-201ENST00000303052 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
CSNK1G1-201ENST00000303052 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
CSNK1G1-201ENST00000303052 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
CSNK1G1-201ENST00000303052 HSP90AA1P07900 732 aaKnown RBP12.86□□□□□ -0.35
CSNK1G1-201ENST00000303052 DDRGK1Q96HY6 314 aa12.85□□□□□ -0.35
CSNK1G1-201ENST00000303052 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
CSNK1G1-201ENST00000303052 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
CSNK1G1-201ENST00000303052 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
CSNK1G1-201ENST00000303052 NOP58Q9Y2X3 529 aaKnown RBP12.82□□□□□ -0.36
CSNK1G1-201ENST00000303052 NEFMP07197 916 aa12.81□□□□□ -0.36
CSNK1G1-201ENST00000303052 DEKP35659 375 aaKnown RBP12.81□□□□□ -0.36
CSNK1G1-201ENST00000303052 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
CSNK1G1-201ENST00000303052 PPM1GO15355 546 aaPredicted RBP12.78□□□□□ -0.36
CSNK1G1-201ENST00000303052 LAS1LQ9Y4W2 734 aaKnown RBP12.77□□□□□ -0.36
CSNK1G1-201ENST00000303052 TMC1Q8TDI8 760 aa12.77□□□□□ -0.37
CSNK1G1-201ENST00000303052 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.77□□□□□ -0.37
CSNK1G1-201ENST00000303052 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
CSNK1G1-201ENST00000303052 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
CSNK1G1-201ENST00000303052 NAP1L5Q96NT1 182 aaPredicted RBP12.73□□□□□ -0.37
CSNK1G1-201ENST00000303052 ERICH6BQ5W0A0 696 aa12.73□□□□□ -0.37
CSNK1G1-201ENST00000303052 TRIM44Q96DX7 344 aaPredicted RBP12.72□□□□□ -0.37
CSNK1G1-201ENST00000303052 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
CSNK1G1-201ENST00000303052 BECN1Q14457 450 aa12.71□□□□□ -0.37
CSNK1G1-201ENST00000303052 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.38
CSNK1G1-201ENST00000303052 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
CSNK1G1-201ENST00000303052 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
CSNK1G1-201ENST00000303052 SLC24A1O60721 1099 aa12.66□□□□□ -0.38
CSNK1G1-201ENST00000303052 WDR43Q15061 677 aaKnown RBP eCLIP12.65□□□□□ -0.38
CSNK1G1-201ENST00000303052 TNNT2P45379 298 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms