RNA–Protein interactions for RNA: ENST00000453985.6

ABCA9-202, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5 BASIC

Gene ABCA9, Length 6,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-202ENST00000453985 DCAF8L2P0C7V8 631 aa14.62□□□□□ -0.07
ABCA9-202ENST00000453985 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
ABCA9-202ENST00000453985 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
ABCA9-202ENST00000453985 SUPT5HO00267 1087 aaKnown RBP13.81□□□□□ -0.2
ABCA9-202ENST00000453985 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
ABCA9-202ENST00000453985 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
ABCA9-202ENST00000453985 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
ABCA9-202ENST00000453985 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
ABCA9-202ENST00000453985 APLP2Q06481 763 aa13.51□□□□□ -0.25
ABCA9-202ENST00000453985 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
ABCA9-202ENST00000453985 MYT1Q01538 1121 aa13.33□□□□□ -0.28
ABCA9-202ENST00000453985 TTBK1Q5TCY1 1321 aaPredicted RBP13.3□□□□□ -0.28
ABCA9-202ENST00000453985 CENPBP07199 599 aaPredicted RBP13.23□□□□□ -0.29
ABCA9-202ENST00000453985 NEFLP07196 543 aa13.15□□□□□ -0.3
ABCA9-202ENST00000453985 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
ABCA9-202ENST00000453985 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
ABCA9-202ENST00000453985 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
ABCA9-202ENST00000453985 ATP1B4Q9UN42 357 aaPredicted RBP13.06□□□□□ -0.32
ABCA9-202ENST00000453985 YTHDC1Q96MU7 727 aaKnown RBP12.99□□□□□ -0.33
ABCA9-202ENST00000453985 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
ABCA9-202ENST00000453985 ZEB1P37275 1124 aaPredicted RBP12.79□□□□□ -0.36
ABCA9-202ENST00000453985 POLR3GLQ9BT43 218 aa12.78□□□□□ -0.36
ABCA9-202ENST00000453985 MYT1LQ9UL68 1186 aa12.75□□□□□ -0.37
ABCA9-202ENST00000453985 CNGB1Q14028 1251 aaPredicted RBP12.69□□□□□ -0.38
ABCA9-202ENST00000453985 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
ABCA9-202ENST00000453985 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
ABCA9-202ENST00000453985 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
ABCA9-202ENST00000453985 UBTFP17480 764 aaKnown RBP12.63□□□□□ -0.39
ABCA9-202ENST00000453985 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
ABCA9-202ENST00000453985 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
ABCA9-202ENST00000453985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
ABCA9-202ENST00000453985 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
ABCA9-202ENST00000453985 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
ABCA9-202ENST00000453985 ITGAEP38570 1179 aa12.46□□□□□ -0.41
ABCA9-202ENST00000453985 ABCC9O60706 1549 aa12.46□□□□□ -0.42
ABCA9-202ENST00000453985 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
ABCA9-202ENST00000453985 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
ABCA9-202ENST00000453985 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
ABCA9-202ENST00000453985 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
ABCA9-202ENST00000453985 LOC105371045A0A1W2PR82 267 aa12.28□□□□□ -0.44
ABCA9-202ENST00000453985 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
ABCA9-202ENST00000453985 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
ABCA9-202ENST00000453985 HRCP23327 699 aa12.18□□□□□ -0.46
ABCA9-202ENST00000453985 BCANQ96GW7 911 aa12.18□□□□□ -0.46
ABCA9-202ENST00000453985 CANXP27824 592 aaKnown RBP12.15□□□□□ -0.47
ABCA9-202ENST00000453985 CDK11AQ9UQ88 783 aaPredicted RBP12.11□□□□□ -0.47
ABCA9-202ENST00000453985 ANP32BQ92688 251 aaKnown RBP12.09□□□□□ -0.47
ABCA9-202ENST00000453985 NEFMP07197 916 aa12.06□□□□□ -0.48
ABCA9-202ENST00000453985 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
ABCA9-202ENST00000453985 ZNF326Q5BKZ1 582 aaKnown RBP12.03□□□□□ -0.48
ABCA9-202ENST00000453985 HSP90AA1P07900 732 aaKnown RBP12□□□□□ -0.49
ABCA9-202ENST00000453985 DIEXFQ68CQ4 756 aaKnown RBP12□□□□□ -0.49
ABCA9-202ENST00000453985 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
ABCA9-202ENST00000453985 GLIPR1L2Q4G1C9 344 aa11.99□□□□□ -0.49
ABCA9-202ENST00000453985 CDK11BP21127 795 aaKnown RBP11.98□□□□□ -0.49
ABCA9-202ENST00000453985 NEUROD1Q13562 356 aa11.98□□□□□ -0.49
ABCA9-202ENST00000453985 ANP32AP39687 249 aaKnown RBP11.97□□□□□ -0.49
ABCA9-202ENST00000453985 FAM50AQ14320 339 aaKnown RBP11.97□□□□□ -0.49
ABCA9-202ENST00000453985 ZCCHC6Q5VYS8 1495 aaKnown RBP11.95□□□□□ -0.5
ABCA9-202ENST00000453985 ANP32CO43423 234 aa11.93□□□□□ -0.5
ABCA9-202ENST00000453985 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
ABCA9-202ENST00000453985 CCDC180Q9P1Z9 1646 aa11.87□□□□□ -0.51
ABCA9-202ENST00000453985 GTF3C3Q9Y5Q9 886 aa11.87□□□□□ -0.51
ABCA9-202ENST00000453985 FBLN2P98095 1184 aa11.87□□□□□ -0.51
ABCA9-202ENST00000453985 ARXQ96QS3 562 aa11.86□□□□□ -0.51
ABCA9-202ENST00000453985 CSRNP3Q8WYN3 585 aa11.84□□□□□ -0.51
ABCA9-202ENST00000453985 UPF2Q9HAU5 1272 aaKnown RBP11.82□□□□□ -0.52
ABCA9-202ENST00000453985 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
ABCA9-202ENST00000453985 PLPPR3Q6T4P5 718 aa11.75□□□□□ -0.53
ABCA9-202ENST00000453985 A0A0G2JS52 829 aa11.74□□□□□ -0.53
ABCA9-202ENST00000453985 TULP1O00294 542 aaPredicted RBP11.74□□□□□ -0.53
ABCA9-202ENST00000453985 ESF1Q9H501 851 aaKnown RBP11.7□□□□□ -0.54
ABCA9-202ENST00000453985 NBR1Q14596 966 aa11.7□□□□□ -0.54
ABCA9-202ENST00000453985 ARID3CA6NKF2 412 aa11.68□□□□□ -0.54
ABCA9-202ENST00000453985 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
ABCA9-202ENST00000453985 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
ABCA9-202ENST00000453985 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
ABCA9-202ENST00000453985 TNNT2P45379 298 aaPredicted RBP11.65□□□□□ -0.54
ABCA9-202ENST00000453985 NCBP3Q53F19 620 aaKnown RBP11.64□□□□□ -0.55
ABCA9-202ENST00000453985 SALL2Q9Y467 1007 aaPredicted RBP11.64□□□□□ -0.55
ABCA9-202ENST00000453985 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
ABCA9-202ENST00000453985 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.61□□□□□ -0.55
ABCA9-202ENST00000453985 FKBP8Q14318 412 aa11.6□□□□□ -0.55
ABCA9-202ENST00000453985 NCLP19338 710 aaKnown RBP11.59□□□□□ -0.55
ABCA9-202ENST00000453985 TRIM44Q96DX7 344 aaPredicted RBP11.59□□□□□ -0.55
ABCA9-202ENST00000453985 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
ABCA9-202ENST00000453985 NACADO15069 1562 aa11.58□□□□□ -0.56
ABCA9-202ENST00000453985 ZRSR1Q15695 479 aaKnown RBP11.57□□□□□ -0.56
ABCA9-202ENST00000453985 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
ABCA9-202ENST00000453985 TPRNQ4KMQ1 711 aa11.55□□□□□ -0.56
ABCA9-202ENST00000453985 RSF1Q96T23 1441 aaPredicted RBP11.55□□□□□ -0.56
ABCA9-202ENST00000453985 DNTTIP2Q5QJE6 756 aaKnown RBP11.54□□□□□ -0.56
ABCA9-202ENST00000453985 MYH16Q9H6N6 1097 aa11.54□□□□□ -0.56
ABCA9-202ENST00000453985 PTMAP06454 111 aaKnown RBP11.54□□□□□ -0.56
ABCA9-202ENST00000453985 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
ABCA9-202ENST00000453985 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
ABCA9-202ENST00000453985 ZBTB7CA1YPR0 619 aa11.53□□□□□ -0.56
ABCA9-202ENST00000453985 HNRNPUQ00839 825 aaKnown RBP eCLIP11.52□□□□□ -0.57
ABCA9-202ENST00000453985 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
ABCA9-202ENST00000453985 AMER1Q5JTC6 1135 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms