RNA–Protein interactions for RNA: ENST00000313116.11

ZNF41-201, Transcript of zinc finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF41, Length 4,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF41-201ENST00000313116 NISCHQ9Y2I1 1504 aa17.67■□□□□ 0.42
ZNF41-201ENST00000313116 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
ZNF41-201ENST00000313116 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
ZNF41-201ENST00000313116 SHROOM4Q9ULL8 1493 aa16.5■□□□□ 0.23
ZNF41-201ENST00000313116 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
ZNF41-201ENST00000313116 PCGF6Q9BYE7 350 aa15.71■□□□□ 0.11
ZNF41-201ENST00000313116 FAM9AQ8IZU1 332 aaPredicted RBP15.52■□□□□ 0.07
ZNF41-201ENST00000313116 CHIC1Q5VXU3 224 aa15.36■□□□□ 0.05
ZNF41-201ENST00000313116 TRIM41Q8WV44 630 aa15.29■□□□□ 0.04
ZNF41-201ENST00000313116 HRCP23327 699 aa15.26■□□□□ 0.03
ZNF41-201ENST00000313116 LOC105371045A0A1W2PR82 267 aa15.24■□□□□ 0.03
ZNF41-201ENST00000313116 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
ZNF41-201ENST00000313116 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
ZNF41-201ENST00000313116 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
ZNF41-201ENST00000313116 ZEB1P37275 1124 aaPredicted RBP15.06■□□□□ 0
ZNF41-201ENST00000313116 CCER1Q8TC90 406 aaPredicted RBP15□□□□□ -0.01
ZNF41-201ENST00000313116 APLP2Q06481 763 aa14.95□□□□□ -0.02
ZNF41-201ENST00000313116 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
ZNF41-201ENST00000313116 UBTFP17480 764 aaKnown RBP14.86□□□□□ -0.03
ZNF41-201ENST00000313116 ZCCHC6Q5VYS8 1495 aaKnown RBP14.77□□□□□ -0.04
ZNF41-201ENST00000313116 CENPBP07199 599 aaPredicted RBP14.76□□□□□ -0.05
ZNF41-201ENST00000313116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
ZNF41-201ENST00000313116 YTHDC1Q96MU7 727 aaKnown RBP14.65□□□□□ -0.06
ZNF41-201ENST00000313116 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
ZNF41-201ENST00000313116 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.07
ZNF41-201ENST00000313116 ABCC9O60706 1549 aa14.55□□□□□ -0.08
ZNF41-201ENST00000313116 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.08
ZNF41-201ENST00000313116 ATP1B4Q9UN42 357 aaPredicted RBP14.48□□□□□ -0.09
ZNF41-201ENST00000313116 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
ZNF41-201ENST00000313116 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
ZNF41-201ENST00000313116 CCDC180Q9P1Z9 1646 aa14.42□□□□□ -0.1
ZNF41-201ENST00000313116 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
ZNF41-201ENST00000313116 ITGAEP38570 1179 aa14.37□□□□□ -0.11
ZNF41-201ENST00000313116 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
ZNF41-201ENST00000313116 GTF3C3Q9Y5Q9 886 aa14.25□□□□□ -0.13
ZNF41-201ENST00000313116 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
ZNF41-201ENST00000313116 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
ZNF41-201ENST00000313116 ACIN1Q9UKV3 1341 aaKnown RBP14.17□□□□□ -0.14
ZNF41-201ENST00000313116 ZNF316A6NFI3 1004 aaPredicted RBP14.15□□□□□ -0.14
ZNF41-201ENST00000313116 NEFLP07196 543 aa14.13□□□□□ -0.15
ZNF41-201ENST00000313116 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
ZNF41-201ENST00000313116 NEUROD1Q13562 356 aa14.05□□□□□ -0.16
ZNF41-201ENST00000313116 MYT1Q01538 1121 aa14.04□□□□□ -0.16
ZNF41-201ENST00000313116 FAM50AQ14320 339 aaKnown RBP14.01□□□□□ -0.17
ZNF41-201ENST00000313116 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
ZNF41-201ENST00000313116 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
ZNF41-201ENST00000313116 RB1CC1Q8TDY2 1594 aa13.9□□□□□ -0.18
ZNF41-201ENST00000313116 CNGB1Q14028 1251 aaPredicted RBP13.9□□□□□ -0.18
ZNF41-201ENST00000313116 CEP162Q5TB80 1403 aa13.89□□□□□ -0.19
ZNF41-201ENST00000313116 BCANQ96GW7 911 aa13.89□□□□□ -0.19
ZNF41-201ENST00000313116 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
ZNF41-201ENST00000313116 POLR3GLQ9BT43 218 aa13.87□□□□□ -0.19
ZNF41-201ENST00000313116 MIER1Q8N108 512 aa13.86□□□□□ -0.19
ZNF41-201ENST00000313116 CLIP1P30622 1438 aa13.81□□□□□ -0.2
ZNF41-201ENST00000313116 MROH2BQ7Z745 1585 aa13.8□□□□□ -0.2
ZNF41-201ENST00000313116 NACADO15069 1562 aa13.79□□□□□ -0.2
ZNF41-201ENST00000313116 TNIKQ9UKE5 1360 aa13.78□□□□□ -0.2
ZNF41-201ENST00000313116 TRIM52Q96A61 297 aa13.77□□□□□ -0.21
ZNF41-201ENST00000313116 SOGA1O94964 1423 aa13.76□□□□□ -0.21
ZNF41-201ENST00000313116 ANP32CO43423 234 aa13.75□□□□□ -0.21
ZNF41-201ENST00000313116 GOLGA3Q08378 1498 aa13.74□□□□□ -0.21
ZNF41-201ENST00000313116 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
ZNF41-201ENST00000313116 EEA1Q15075 1411 aa13.74□□□□□ -0.21
ZNF41-201ENST00000313116 BAZ1AQ9NRL2 1556 aaPredicted RBP13.7□□□□□ -0.22
ZNF41-201ENST00000313116 DDX10Q13206 875 aaKnown RBP13.7□□□□□ -0.22
ZNF41-201ENST00000313116 CCDC88BA6NC98 1476 aa13.68□□□□□ -0.22
ZNF41-201ENST00000313116 ARID3CA6NKF2 412 aa13.67□□□□□ -0.22
ZNF41-201ENST00000313116 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
ZNF41-201ENST00000313116 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
ZNF41-201ENST00000313116 FKBP8Q14318 412 aa13.62□□□□□ -0.23
ZNF41-201ENST00000313116 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
ZNF41-201ENST00000313116 WIZO95785 1651 aa13.61□□□□□ -0.23
ZNF41-201ENST00000313116 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
ZNF41-201ENST00000313116 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
ZNF41-201ENST00000313116 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
ZNF41-201ENST00000313116 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
ZNF41-201ENST00000313116 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
ZNF41-201ENST00000313116 CHIC2Q9UKJ5 165 aa13.51□□□□□ -0.25
ZNF41-201ENST00000313116 HNRNPUQ00839 825 aaKnown RBP eCLIP13.51□□□□□ -0.25
ZNF41-201ENST00000313116 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
ZNF41-201ENST00000313116 KANK4Q5T7N3 995 aaPredicted RBP13.48□□□□□ -0.25
ZNF41-201ENST00000313116 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
ZNF41-201ENST00000313116 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
ZNF41-201ENST00000313116 FBLN2P98095 1184 aa13.47□□□□□ -0.25
ZNF41-201ENST00000313116 SIN3AQ96ST3 1273 aa13.47□□□□□ -0.25
ZNF41-201ENST00000313116 KIF27Q86VH2 1401 aa13.46□□□□□ -0.25
ZNF41-201ENST00000313116 ZNF777Q9ULD5 760 aaPredicted RBP13.44□□□□□ -0.26
ZNF41-201ENST00000313116 MTUS2Q5JR59 1369 aa13.44□□□□□ -0.26
ZNF41-201ENST00000313116 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
ZNF41-201ENST00000313116 FAM9BQ8IZU0 186 aa13.43□□□□□ -0.26
ZNF41-201ENST00000313116 CCNB3Q8WWL7 1395 aa13.41□□□□□ -0.26
ZNF41-201ENST00000313116 IRX6P78412 446 aaPredicted RBP13.4□□□□□ -0.26
ZNF41-201ENST00000313116 DAXXQ9UER7 740 aaPredicted RBP13.4□□□□□ -0.26
ZNF41-201ENST00000313116 RRP7BPQ9NSQ0 103 aa13.39□□□□□ -0.27
ZNF41-201ENST00000313116 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
ZNF41-201ENST00000313116 RTL5Q5HYW3 569 aaPredicted RBP13.36□□□□□ -0.27
ZNF41-201ENST00000313116 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
ZNF41-201ENST00000313116 MRS2Q9HD23 443 aa13.32□□□□□ -0.28
ZNF41-201ENST00000313116 SLC4A1APQ9BWU0 796 aaKnown RBP13.31□□□□□ -0.28
ZNF41-201ENST00000313116 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms