RNA–Protein interactions for RNA: ENST00000316375.2

C11orf42-201, Transcript of chromosome 11 open reading frame 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf42, Length 1,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42-201ENST00000316375 NISCHQ9Y2I1 1504 aa25.23■■□□□ 1.63
C11orf42-201ENST00000316375 ABCC9O60706 1549 aa22.68■■□□□ 1.22
C11orf42-201ENST00000316375 DNAJC5BQ9UF47 199 aa22.08■■□□□ 1.13
C11orf42-201ENST00000316375 CCDC180Q9P1Z9 1646 aa22■■□□□ 1.11
C11orf42-201ENST00000316375 RB1CC1Q8TDY2 1594 aa21.27■□□□□ 0.99
C11orf42-201ENST00000316375 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
C11orf42-201ENST00000316375 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
C11orf42-201ENST00000316375 NACADO15069 1562 aa20.93■□□□□ 0.94
C11orf42-201ENST00000316375 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
C11orf42-201ENST00000316375 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
C11orf42-201ENST00000316375 DNAJC5Q9H3Z4 198 aa20.9■□□□□ 0.94
C11orf42-201ENST00000316375 DCAF8L2P0C7V8 631 aa20.77■□□□□ 0.92
C11orf42-201ENST00000316375 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
C11orf42-201ENST00000316375 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.9
C11orf42-201ENST00000316375 CECR2Q9BXF3 1484 aa20.54■□□□□ 0.88
C11orf42-201ENST00000316375 SHROOM4Q9ULL8 1493 aa20.54■□□□□ 0.88
C11orf42-201ENST00000316375 CC2D2AQ9P2K1 1620 aa20.52■□□□□ 0.88
C11orf42-201ENST00000316375 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
C11orf42-201ENST00000316375 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
C11orf42-201ENST00000316375 CUX2O14529 1486 aa19.95■□□□□ 0.78
C11orf42-201ENST00000316375 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
C11orf42-201ENST00000316375 ERCC6Q03468 1493 aa19.61■□□□□ 0.73
C11orf42-201ENST00000316375 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
C11orf42-201ENST00000316375 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
C11orf42-201ENST00000316375 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
C11orf42-201ENST00000316375 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
C11orf42-201ENST00000316375 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
C11orf42-201ENST00000316375 NCAPD3P42695 1498 aa19.32■□□□□ 0.68
C11orf42-201ENST00000316375 WIZO95785 1651 aa19.32■□□□□ 0.68
C11orf42-201ENST00000316375 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
C11orf42-201ENST00000316375 NESP48681 1621 aa19.27■□□□□ 0.68
C11orf42-201ENST00000316375 PEG3Q9GZU2 1588 aa19.16■□□□□ 0.66
C11orf42-201ENST00000316375 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
C11orf42-201ENST00000316375 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
C11orf42-201ENST00000316375 HMGXB3Q12766 1538 aa19.11■□□□□ 0.65
C11orf42-201ENST00000316375 KIF21AQ7Z4S6 1674 aa19.06■□□□□ 0.64
C11orf42-201ENST00000316375 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
C11orf42-201ENST00000316375 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
C11orf42-201ENST00000316375 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
C11orf42-201ENST00000316375 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
C11orf42-201ENST00000316375 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
C11orf42-201ENST00000316375 PDS5BQ9NTI5 1447 aa18.9■□□□□ 0.62
C11orf42-201ENST00000316375 OSCARQ8IYS5 282 aa18.83■□□□□ 0.6
C11orf42-201ENST00000316375 WDR62O43379 1518 aa18.83■□□□□ 0.6
C11orf42-201ENST00000316375 MRC2Q9UBG0 1479 aa18.8■□□□□ 0.6
C11orf42-201ENST00000316375 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
C11orf42-201ENST00000316375 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
C11orf42-201ENST00000316375 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
C11orf42-201ENST00000316375 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
C11orf42-201ENST00000316375 ARHGEF11O15085 1522 aa18.59■□□□□ 0.57
C11orf42-201ENST00000316375 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
C11orf42-201ENST00000316375 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
C11orf42-201ENST00000316375 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
C11orf42-201ENST00000316375 CFTRP13569 1480 aa18.48■□□□□ 0.55
C11orf42-201ENST00000316375 TRHP20396 242 aaPredicted RBP18.46■□□□□ 0.55
C11orf42-201ENST00000316375 FANCD2Q9BXW9 1451 aa18.45■□□□□ 0.54
C11orf42-201ENST00000316375 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
C11orf42-201ENST00000316375 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
C11orf42-201ENST00000316375 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
C11orf42-201ENST00000316375 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
C11orf42-201ENST00000316375 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
C11orf42-201ENST00000316375 SYNJ1O43426 1573 aa18.33■□□□□ 0.52
C11orf42-201ENST00000316375 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
C11orf42-201ENST00000316375 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
C11orf42-201ENST00000316375 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
C11orf42-201ENST00000316375 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
C11orf42-201ENST00000316375 BIVM-ERCC5R4GMW8 1640 aa18.27■□□□□ 0.52
C11orf42-201ENST00000316375 EEA1Q15075 1411 aa18.25■□□□□ 0.51
C11orf42-201ENST00000316375 CHD1O14646 1710 aa18.23■□□□□ 0.51
C11orf42-201ENST00000316375 CUX1P39880 1505 aa18.21■□□□□ 0.51
C11orf42-201ENST00000316375 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
C11orf42-201ENST00000316375 SOGA1O94964 1423 aa18.2■□□□□ 0.5
C11orf42-201ENST00000316375 EIF4G3O43432 1585 aaKnown RBP18.17■□□□□ 0.5
C11orf42-201ENST00000316375 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
C11orf42-201ENST00000316375 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
C11orf42-201ENST00000316375 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
C11orf42-201ENST00000316375 TOPBP1Q92547 1522 aa18.02■□□□□ 0.47
C11orf42-201ENST00000316375 FGD5Q6ZNL6 1462 aa18■□□□□ 0.47
C11orf42-201ENST00000316375 KIF21BO75037 1637 aa17.98■□□□□ 0.47
C11orf42-201ENST00000316375 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
C11orf42-201ENST00000316375 AQRO60306 1485 aaKnown RBP eCLIP17.98■□□□□ 0.47
C11orf42-201ENST00000316375 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
C11orf42-201ENST00000316375 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
C11orf42-201ENST00000316375 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
C11orf42-201ENST00000316375 GOLGA3Q08378 1498 aa17.96■□□□□ 0.47
C11orf42-201ENST00000316375 ILDR1Q86SU0 546 aaPredicted RBP17.96■□□□□ 0.47
C11orf42-201ENST00000316375 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
C11orf42-201ENST00000316375 FBLN2P98095 1184 aa17.94■□□□□ 0.46
C11orf42-201ENST00000316375 POLA1P09884 1462 aaPredicted RBP17.9■□□□□ 0.46
C11orf42-201ENST00000316375 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
C11orf42-201ENST00000316375 PRXQ9BXM0 1461 aa17.87■□□□□ 0.45
C11orf42-201ENST00000316375 ABCA10Q8WWZ4 1543 aa17.87■□□□□ 0.45
C11orf42-201ENST00000316375 ERICH3Q5RHP9 1530 aa17.86■□□□□ 0.45
C11orf42-201ENST00000316375 RAD54L2Q9Y4B4 1467 aa17.83■□□□□ 0.45
C11orf42-201ENST00000316375 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
C11orf42-201ENST00000316375 IGF1RP08069 1367 aa17.81■□□□□ 0.44
C11orf42-201ENST00000316375 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
C11orf42-201ENST00000316375 CEP162Q5TB80 1403 aa17.8■□□□□ 0.44
C11orf42-201ENST00000316375 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
C11orf42-201ENST00000316375 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms