RNA–Protein interactions for RNA: ENST00000261597.8

NDC80-201, Transcript of NDC80, kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC80, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-201ENST00000261597 NISCHQ9Y2I1 1504 aa15.35■□□□□ 0.05
NDC80-201ENST00000261597 CHIC1Q5VXU3 224 aa15.01□□□□□ -0.01
NDC80-201ENST00000261597 AEBP2Q6ZN18 517 aaPredicted RBP14.63□□□□□ -0.07
NDC80-201ENST00000261597 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
NDC80-201ENST00000261597 PHF23Q9BUL5 403 aaPredicted RBP13.35□□□□□ -0.27
NDC80-201ENST00000261597 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
NDC80-201ENST00000261597 ABCC9O60706 1549 aa12.72□□□□□ -0.37
NDC80-201ENST00000261597 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.37
NDC80-201ENST00000261597 DCAF8L2P0C7V8 631 aa12.69□□□□□ -0.38
NDC80-201ENST00000261597 MYO15BQ96JP2 1530 aa12.6□□□□□ -0.39
NDC80-201ENST00000261597 NACADO15069 1562 aa12.53□□□□□ -0.4
NDC80-201ENST00000261597 PLPPR3Q6T4P5 718 aa12.49□□□□□ -0.41
NDC80-201ENST00000261597 RB1CC1Q8TDY2 1594 aa12.42□□□□□ -0.42
NDC80-201ENST00000261597 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
NDC80-201ENST00000261597 SCRIBQ14160 1630 aa12.29□□□□□ -0.44
NDC80-201ENST00000261597 SENP3Q9H4L4 574 aaPredicted RBP12.17□□□□□ -0.46
NDC80-201ENST00000261597 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
NDC80-201ENST00000261597 BICRAQ9NZM4 1560 aa12.03□□□□□ -0.48
NDC80-201ENST00000261597 PABPN1Q86U42 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
NDC80-201ENST00000261597 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
NDC80-201ENST00000261597 SUPT5HO00267 1087 aaKnown RBP11.94□□□□□ -0.5
NDC80-201ENST00000261597 CECR2Q9BXF3 1484 aa11.91□□□□□ -0.5
NDC80-201ENST00000261597 RSF1Q96T23 1441 aaPredicted RBP11.87□□□□□ -0.51
NDC80-201ENST00000261597 BAZ1AQ9NRL2 1556 aaPredicted RBP11.85□□□□□ -0.51
NDC80-201ENST00000261597 MROH2BQ7Z745 1585 aa11.83□□□□□ -0.52
NDC80-201ENST00000261597 KCNA4P22459 653 aa11.82□□□□□ -0.52
NDC80-201ENST00000261597 SMARCA4P51532 1647 aa11.8□□□□□ -0.52
NDC80-201ENST00000261597 ADRA2BP18089 450 aa11.76□□□□□ -0.53
NDC80-201ENST00000261597 WIZO95785 1651 aa11.73□□□□□ -0.53
NDC80-201ENST00000261597 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
NDC80-201ENST00000261597 EIF4G1Q04637 1599 aaKnown RBP11.67□□□□□ -0.54
NDC80-201ENST00000261597 SMARCA2P51531 1590 aa11.64□□□□□ -0.55
NDC80-201ENST00000261597 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
NDC80-201ENST00000261597 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
NDC80-201ENST00000261597 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
NDC80-201ENST00000261597 BAZ1BQ9UIG0 1483 aaKnown RBP11.56□□□□□ -0.56
NDC80-201ENST00000261597 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
NDC80-201ENST00000261597 CC2D2AQ9P2K1 1620 aa11.52□□□□□ -0.57
NDC80-201ENST00000261597 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
NDC80-201ENST00000261597 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
NDC80-201ENST00000261597 CCDC88BA6NC98 1476 aa11.5□□□□□ -0.57
NDC80-201ENST00000261597 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
NDC80-201ENST00000261597 SLC4A1APQ9BWU0 796 aaKnown RBP11.35□□□□□ -0.59
NDC80-201ENST00000261597 CFTRP13569 1480 aa11.28□□□□□ -0.6
NDC80-201ENST00000261597 FOXD1Q16676 465 aa11.27□□□□□ -0.61
NDC80-201ENST00000261597 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
NDC80-201ENST00000261597 TRIM41Q8WV44 630 aa11.26□□□□□ -0.61
NDC80-201ENST00000261597 PRDM2Q13029 1718 aa11.2□□□□□ -0.62
NDC80-201ENST00000261597 ABCC8Q09428 1581 aa11.2□□□□□ -0.62
NDC80-201ENST00000261597 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
NDC80-201ENST00000261597 LAMC3Q9Y6N6 1575 aa11.17□□□□□ -0.62
NDC80-201ENST00000261597 NESP48681 1621 aa11.14□□□□□ -0.63
NDC80-201ENST00000261597 PPP4R3CPQ6ZMV5 832 aa11.13□□□□□ -0.63
NDC80-201ENST00000261597 FANCD2Q9BXW9 1451 aa11.11□□□□□ -0.63
NDC80-201ENST00000261597 SYNJ1O43426 1573 aa11.1□□□□□ -0.63
NDC80-201ENST00000261597 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
NDC80-201ENST00000261597 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
NDC80-201ENST00000261597 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.64
NDC80-201ENST00000261597 CUX1P39880 1505 aa11.07□□□□□ -0.64
NDC80-201ENST00000261597 CEP164Q9UPV0 1460 aa11.05□□□□□ -0.64
NDC80-201ENST00000261597 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
NDC80-201ENST00000261597 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
NDC80-201ENST00000261597 FAM9AQ8IZU1 332 aaPredicted RBP11.01□□□□□ -0.65
NDC80-201ENST00000261597 EEA1Q15075 1411 aa11.01□□□□□ -0.65
NDC80-201ENST00000261597 DNMBPQ6XZF7 1577 aa11□□□□□ -0.65
NDC80-201ENST00000261597 KIF21AQ7Z4S6 1674 aa11□□□□□ -0.65
NDC80-201ENST00000261597 NCBP3Q53F19 620 aaKnown RBP11□□□□□ -0.65
NDC80-201ENST00000261597 SOGA1O94964 1423 aa11□□□□□ -0.65
NDC80-201ENST00000261597 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
NDC80-201ENST00000261597 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
NDC80-201ENST00000261597 FGD5Q6ZNL6 1462 aa10.96□□□□□ -0.65
NDC80-201ENST00000261597 LOC105371045A0A1W2PR82 267 aa10.96□□□□□ -0.66
NDC80-201ENST00000261597 RUSC2Q8N2Y8 1516 aa10.95□□□□□ -0.66
NDC80-201ENST00000261597 MRC2Q9UBG0 1479 aa10.94□□□□□ -0.66
NDC80-201ENST00000261597 ZBTB22O15209 634 aa10.94□□□□□ -0.66
NDC80-201ENST00000261597 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
NDC80-201ENST00000261597 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
NDC80-201ENST00000261597 POLA1P09884 1462 aaPredicted RBP10.92□□□□□ -0.66
NDC80-201ENST00000261597 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
NDC80-201ENST00000261597 ABCA10Q8WWZ4 1543 aa10.89□□□□□ -0.67
NDC80-201ENST00000261597 WDR62O43379 1518 aa10.88□□□□□ -0.67
NDC80-201ENST00000261597 CUX2O14529 1486 aa10.88□□□□□ -0.67
NDC80-201ENST00000261597 RAD54L2Q9Y4B4 1467 aa10.88□□□□□ -0.67
NDC80-201ENST00000261597 THOC2Q8NI27 1593 aaKnown RBP10.85□□□□□ -0.67
NDC80-201ENST00000261597 KIF21BO75037 1637 aa10.84□□□□□ -0.67
NDC80-201ENST00000261597 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
NDC80-201ENST00000261597 IGF1RP08069 1367 aa10.83□□□□□ -0.68
NDC80-201ENST00000261597 WDR97A6NE52 1622 aa10.83□□□□□ -0.68
NDC80-201ENST00000261597 TARBP1Q13395 1621 aaKnown RBP10.83□□□□□ -0.68
NDC80-201ENST00000261597 GOLGA3Q08378 1498 aa10.82□□□□□ -0.68
NDC80-201ENST00000261597 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
NDC80-201ENST00000261597 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
NDC80-201ENST00000261597 TNIKQ9UKE5 1360 aa10.8□□□□□ -0.68
NDC80-201ENST00000261597 ERICH3Q5RHP9 1530 aa10.79□□□□□ -0.68
NDC80-201ENST00000261597 UBTFP17480 764 aaKnown RBP10.79□□□□□ -0.68
NDC80-201ENST00000261597 TDRD9Q8NDG6 1382 aaKnown RBP10.78□□□□□ -0.68
NDC80-201ENST00000261597 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
NDC80-201ENST00000261597 ABCA5Q8WWZ7 1642 aa10.78□□□□□ -0.68
NDC80-201ENST00000261597 RAPGEF2Q9Y4G8 1499 aa10.77□□□□□ -0.68
NDC80-201ENST00000261597 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms