RNA–Protein interactions for RNA: ENST00000332995.11

PHACTR1-201, Transcript of phosphatase and actin regulator 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PHACTR1, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-201ENST00000332995 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
PHACTR1-201ENST00000332995 NISCHQ9Y2I1 1504 aa17.14■□□□□ 0.33
PHACTR1-201ENST00000332995 SUPT5HO00267 1087 aaKnown RBP16.39■□□□□ 0.21
PHACTR1-201ENST00000332995 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
PHACTR1-201ENST00000332995 SHROOM4Q9ULL8 1493 aa16.14■□□□□ 0.17
PHACTR1-201ENST00000332995 APLP2Q06481 763 aa16.03■□□□□ 0.16
PHACTR1-201ENST00000332995 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
PHACTR1-201ENST00000332995 PELP1Q8IZL8 1130 aaKnown RBP15.45■□□□□ 0.06
PHACTR1-201ENST00000332995 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
PHACTR1-201ENST00000332995 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
PHACTR1-201ENST00000332995 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
PHACTR1-201ENST00000332995 RANGAP1P46060 587 aaPredicted RBP15.26■□□□□ 0.03
PHACTR1-201ENST00000332995 MYT1LQ9UL68 1186 aa15.11■□□□□ 0.01
PHACTR1-201ENST00000332995 TTBK1Q5TCY1 1321 aaPredicted RBP15.08■□□□□ 0
PHACTR1-201ENST00000332995 ABCC9O60706 1549 aa15.06■□□□□ 0
PHACTR1-201ENST00000332995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ 0
PHACTR1-201ENST00000332995 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ 0
PHACTR1-201ENST00000332995 ZEB1P37275 1124 aaPredicted RBP15□□□□□ -0.01
PHACTR1-201ENST00000332995 PCGF6Q9BYE7 350 aa14.92□□□□□ -0.02
PHACTR1-201ENST00000332995 CCER1Q8TC90 406 aaPredicted RBP14.89□□□□□ -0.03
PHACTR1-201ENST00000332995 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
PHACTR1-201ENST00000332995 CENPBP07199 599 aaPredicted RBP14.71□□□□□ -0.05
PHACTR1-201ENST00000332995 NEFLP07196 543 aa14.62□□□□□ -0.07
PHACTR1-201ENST00000332995 FBLN2P98095 1184 aa14.6□□□□□ -0.07
PHACTR1-201ENST00000332995 ITGAEP38570 1179 aa14.57□□□□□ -0.08
PHACTR1-201ENST00000332995 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
PHACTR1-201ENST00000332995 CHIC1Q5VXU3 224 aa14.51□□□□□ -0.09
PHACTR1-201ENST00000332995 TRIM26Q12899 539 aaPredicted RBP14.47□□□□□ -0.09
PHACTR1-201ENST00000332995 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
PHACTR1-201ENST00000332995 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
PHACTR1-201ENST00000332995 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
PHACTR1-201ENST00000332995 CDK11AQ9UQ88 783 aaPredicted RBP14.43□□□□□ -0.1
PHACTR1-201ENST00000332995 ESF1Q9H501 851 aaKnown RBP14.4□□□□□ -0.1
PHACTR1-201ENST00000332995 FAM50AQ14320 339 aaKnown RBP14.39□□□□□ -0.11
PHACTR1-201ENST00000332995 PPARGC1BQ86YN6 1023 aaKnown RBP14.37□□□□□ -0.11
PHACTR1-201ENST00000332995 TRIM52Q96A61 297 aa14.37□□□□□ -0.11
PHACTR1-201ENST00000332995 SCRIBQ14160 1630 aa14.32□□□□□ -0.12
PHACTR1-201ENST00000332995 CCDC180Q9P1Z9 1646 aa14.28□□□□□ -0.12
PHACTR1-201ENST00000332995 BCANQ96GW7 911 aa14.27□□□□□ -0.12
PHACTR1-201ENST00000332995 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
PHACTR1-201ENST00000332995 DAXXQ9UER7 740 aaPredicted RBP14.23□□□□□ -0.13
PHACTR1-201ENST00000332995 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
PHACTR1-201ENST00000332995 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
PHACTR1-201ENST00000332995 NEFMP07197 916 aa14.17□□□□□ -0.14
PHACTR1-201ENST00000332995 YTHDC1Q96MU7 727 aaKnown RBP14.13□□□□□ -0.15
PHACTR1-201ENST00000332995 STAG3Q9UJ98 1225 aa14.13□□□□□ -0.15
PHACTR1-201ENST00000332995 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
PHACTR1-201ENST00000332995 CHMP7Q8WUX9 453 aaPredicted RBP14.11□□□□□ -0.15
PHACTR1-201ENST00000332995 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
PHACTR1-201ENST00000332995 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
PHACTR1-201ENST00000332995 NACADO15069 1562 aa14.07□□□□□ -0.16
PHACTR1-201ENST00000332995 ZBTB47Q9UFB7 747 aaPredicted RBP14.06□□□□□ -0.16
PHACTR1-201ENST00000332995 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
PHACTR1-201ENST00000332995 ZNF326Q5BKZ1 582 aaKnown RBP14.05□□□□□ -0.16
PHACTR1-201ENST00000332995 ARID3CA6NKF2 412 aa14.02□□□□□ -0.16
PHACTR1-201ENST00000332995 NEUROD1Q13562 356 aa14.01□□□□□ -0.17
PHACTR1-201ENST00000332995 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
PHACTR1-201ENST00000332995 TSPY4P0CV99 314 aa13.95□□□□□ -0.18
PHACTR1-201ENST00000332995 TSPY10P0CW01 314 aa13.95□□□□□ -0.18
PHACTR1-201ENST00000332995 ACIN1Q9UKV3 1341 aaKnown RBP13.94□□□□□ -0.18
PHACTR1-201ENST00000332995 SLC24A1O60721 1099 aa13.94□□□□□ -0.18
PHACTR1-201ENST00000332995 CHGAP10645 457 aaKnown RBP13.94□□□□□ -0.18
PHACTR1-201ENST00000332995 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
PHACTR1-201ENST00000332995 HRCP23327 699 aa13.94□□□□□ -0.18
PHACTR1-201ENST00000332995 ANP32CO43423 234 aa13.91□□□□□ -0.18
PHACTR1-201ENST00000332995 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
PHACTR1-201ENST00000332995 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
PHACTR1-201ENST00000332995 PLEKHD1A6NEE1 506 aa13.84□□□□□ -0.19
PHACTR1-201ENST00000332995 ZNF316A6NFI3 1004 aaPredicted RBP13.83□□□□□ -0.2
PHACTR1-201ENST00000332995 CANXP27824 592 aaKnown RBP13.83□□□□□ -0.2
PHACTR1-201ENST00000332995 MTUS2Q5JR59 1369 aa13.82□□□□□ -0.2
PHACTR1-201ENST00000332995 RSF1Q96T23 1441 aaPredicted RBP13.8□□□□□ -0.2
PHACTR1-201ENST00000332995 EEA1Q15075 1411 aa13.78□□□□□ -0.2
PHACTR1-201ENST00000332995 TONSLQ96HA7 1378 aa13.76□□□□□ -0.21
PHACTR1-201ENST00000332995 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
PHACTR1-201ENST00000332995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
PHACTR1-201ENST00000332995 ARID4BQ4LE39 1312 aaPredicted RBP13.75□□□□□ -0.21
PHACTR1-201ENST00000332995 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
PHACTR1-201ENST00000332995 KCNH8Q96L42 1107 aa13.71□□□□□ -0.21
PHACTR1-201ENST00000332995 KIF27Q86VH2 1401 aa13.71□□□□□ -0.22
PHACTR1-201ENST00000332995 NPM2Q86SE8 214 aaKnown RBP13.69□□□□□ -0.22
PHACTR1-201ENST00000332995 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
PHACTR1-201ENST00000332995 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
PHACTR1-201ENST00000332995 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
PHACTR1-201ENST00000332995 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
PHACTR1-201ENST00000332995 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.23
PHACTR1-201ENST00000332995 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
PHACTR1-201ENST00000332995 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
PHACTR1-201ENST00000332995 CHIC2Q9UKJ5 165 aa13.62□□□□□ -0.23
PHACTR1-201ENST00000332995 HDGFP51858 240 aaKnown RBP13.61□□□□□ -0.23
PHACTR1-201ENST00000332995 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
PHACTR1-201ENST00000332995 RTL5Q5HYW3 569 aaPredicted RBP13.61□□□□□ -0.23
PHACTR1-201ENST00000332995 CLIP1P30622 1438 aa13.61□□□□□ -0.23
PHACTR1-201ENST00000332995 MYT1Q01538 1121 aa13.6□□□□□ -0.23
PHACTR1-201ENST00000332995 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
PHACTR1-201ENST00000332995 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
PHACTR1-201ENST00000332995 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
PHACTR1-201ENST00000332995 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
PHACTR1-201ENST00000332995 CARMIL2Q6F5E8 1435 aa13.52□□□□□ -0.24
PHACTR1-201ENST00000332995 WDR43Q15061 677 aaKnown RBP eCLIP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms