RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
CSMD2-205ENST00000373381 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
CSMD2-205ENST00000373381 FAM9AQ8IZU1 332 aaPredicted RBP14.61□□□□□ -0.07
CSMD2-205ENST00000373381 APLP2Q06481 763 aa14.31□□□□□ -0.12
CSMD2-205ENST00000373381 CCER1Q8TC90 406 aaPredicted RBP14.2□□□□□ -0.14
CSMD2-205ENST00000373381 ERICH6Q7L0X2 663 aa14.19□□□□□ -0.14
CSMD2-205ENST00000373381 SUPT5HO00267 1087 aaKnown RBP14.04□□□□□ -0.16
CSMD2-205ENST00000373381 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
CSMD2-205ENST00000373381 DAXXQ9UER7 740 aaPredicted RBP13.71□□□□□ -0.22
CSMD2-205ENST00000373381 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
CSMD2-205ENST00000373381 NEFLP07196 543 aa13.7□□□□□ -0.22
CSMD2-205ENST00000373381 YTHDC1Q96MU7 727 aaKnown RBP13.64□□□□□ -0.23
CSMD2-205ENST00000373381 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
CSMD2-205ENST00000373381 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-205ENST00000373381 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
CSMD2-205ENST00000373381 SHROOM4Q9ULL8 1493 aa13.55□□□□□ -0.24
CSMD2-205ENST00000373381 RANGAP1P46060 587 aaPredicted RBP13.5□□□□□ -0.25
CSMD2-205ENST00000373381 MYT1Q01538 1121 aa13.45□□□□□ -0.26
CSMD2-205ENST00000373381 PCGF6Q9BYE7 350 aa13.42□□□□□ -0.26
CSMD2-205ENST00000373381 ZEB1P37275 1124 aaPredicted RBP13.33□□□□□ -0.28
CSMD2-205ENST00000373381 SLC4A1APQ9BWU0 796 aaKnown RBP13.31□□□□□ -0.28
CSMD2-205ENST00000373381 CHIC1Q5VXU3 224 aa13.28□□□□□ -0.28
CSMD2-205ENST00000373381 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
CSMD2-205ENST00000373381 ZNF316A6NFI3 1004 aaPredicted RBP13.26□□□□□ -0.29
CSMD2-205ENST00000373381 POLR3GLQ9BT43 218 aa13.24□□□□□ -0.29
CSMD2-205ENST00000373381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
CSMD2-205ENST00000373381 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
CSMD2-205ENST00000373381 CLSPNQ9HAW4 1339 aa13.19□□□□□ -0.3
CSMD2-205ENST00000373381 NISCHQ9Y2I1 1504 aa13.15□□□□□ -0.3
CSMD2-205ENST00000373381 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
CSMD2-205ENST00000373381 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
CSMD2-205ENST00000373381 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
CSMD2-205ENST00000373381 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
CSMD2-205ENST00000373381 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
CSMD2-205ENST00000373381 NEFMP07197 916 aa12.89□□□□□ -0.35
CSMD2-205ENST00000373381 ITGAEP38570 1179 aa12.86□□□□□ -0.35
CSMD2-205ENST00000373381 BCANQ96GW7 911 aa12.86□□□□□ -0.35
CSMD2-205ENST00000373381 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
CSMD2-205ENST00000373381 CDK11AQ9UQ88 783 aaPredicted RBP12.76□□□□□ -0.37
CSMD2-205ENST00000373381 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
CSMD2-205ENST00000373381 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
CSMD2-205ENST00000373381 ANP32BQ92688 251 aaKnown RBP12.72□□□□□ -0.37
CSMD2-205ENST00000373381 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
CSMD2-205ENST00000373381 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
CSMD2-205ENST00000373381 HSP90AA1P07900 732 aaKnown RBP12.59□□□□□ -0.39
CSMD2-205ENST00000373381 PPARGC1BQ86YN6 1023 aaKnown RBP12.59□□□□□ -0.39
CSMD2-205ENST00000373381 FAM50AQ14320 339 aaKnown RBP12.53□□□□□ -0.4
CSMD2-205ENST00000373381 ZNF326Q5BKZ1 582 aaKnown RBP12.52□□□□□ -0.41
CSMD2-205ENST00000373381 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
CSMD2-205ENST00000373381 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
CSMD2-205ENST00000373381 A0A0G2JS52 829 aa12.47□□□□□ -0.41
CSMD2-205ENST00000373381 TRIM26Q12899 539 aaPredicted RBP12.47□□□□□ -0.41
CSMD2-205ENST00000373381 FBLN2P98095 1184 aa12.45□□□□□ -0.42
CSMD2-205ENST00000373381 ANP32CO43423 234 aa12.44□□□□□ -0.42
CSMD2-205ENST00000373381 UPF2Q9HAU5 1272 aaKnown RBP12.44□□□□□ -0.42
CSMD2-205ENST00000373381 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
CSMD2-205ENST00000373381 ANP32AP39687 249 aaKnown RBP12.41□□□□□ -0.42
CSMD2-205ENST00000373381 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
CSMD2-205ENST00000373381 NEUROD1Q13562 356 aa12.36□□□□□ -0.43
CSMD2-205ENST00000373381 GLIPR1L2Q4G1C9 344 aa12.36□□□□□ -0.43
CSMD2-205ENST00000373381 HRCP23327 699 aa12.31□□□□□ -0.44
CSMD2-205ENST00000373381 MYH16Q9H6N6 1097 aa12.27□□□□□ -0.44
CSMD2-205ENST00000373381 NPM1P06748 294 aaKnown RBP eCLIP12.27□□□□□ -0.45
CSMD2-205ENST00000373381 TULP1O00294 542 aaPredicted RBP12.26□□□□□ -0.45
CSMD2-205ENST00000373381 NPHP1O15259 732 aa12.26□□□□□ -0.45
CSMD2-205ENST00000373381 EIF5BO60841 1220 aaKnown RBP12.26□□□□□ -0.45
CSMD2-205ENST00000373381 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
CSMD2-205ENST00000373381 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
CSMD2-205ENST00000373381 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
CSMD2-205ENST00000373381 ZRSR1Q15695 479 aaKnown RBP12.22□□□□□ -0.45
CSMD2-205ENST00000373381 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.22□□□□□ -0.45
CSMD2-205ENST00000373381 C14orf37Q86TY3 774 aa12.22□□□□□ -0.45
CSMD2-205ENST00000373381 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
CSMD2-205ENST00000373381 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
CSMD2-205ENST00000373381 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
CSMD2-205ENST00000373381 TRIM44Q96DX7 344 aaPredicted RBP12.13□□□□□ -0.47
CSMD2-205ENST00000373381 ZBTB7CA1YPR0 619 aa12.12□□□□□ -0.47
CSMD2-205ENST00000373381 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
CSMD2-205ENST00000373381 ARXQ96QS3 562 aa12.1□□□□□ -0.47
CSMD2-205ENST00000373381 CLSTN1O94985 981 aa12.09□□□□□ -0.47
CSMD2-205ENST00000373381 GOLGA6L22H0YM25 854 aa12.06□□□□□ -0.48
CSMD2-205ENST00000373381 PRM3Q9NNZ6 103 aa12.06□□□□□ -0.48
CSMD2-205ENST00000373381 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
CSMD2-205ENST00000373381 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
CSMD2-205ENST00000373381 CASC1Q6TDU7 716 aa12.05□□□□□ -0.48
CSMD2-205ENST00000373381 GOLGA6L6A8MZA4 724 aa12.04□□□□□ -0.48
CSMD2-205ENST00000373381 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSMD2-205ENST00000373381 KRI1Q8N9T8 703 aaKnown RBP12.03□□□□□ -0.48
CSMD2-205ENST00000373381 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
CSMD2-205ENST00000373381 PPP1R15AO75807 674 aaPredicted RBP12.02□□□□□ -0.48
CSMD2-205ENST00000373381 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.49
CSMD2-205ENST00000373381 NRDCO43847 1150 aa12□□□□□ -0.49
CSMD2-205ENST00000373381 PTMAP06454 111 aaKnown RBP11.99□□□□□ -0.49
CSMD2-205ENST00000373381 BECN1Q14457 450 aa11.97□□□□□ -0.49
CSMD2-205ENST00000373381 L1TD1Q5T7N2 865 aaKnown RBP11.97□□□□□ -0.49
CSMD2-205ENST00000373381 ARID4BQ4LE39 1312 aaPredicted RBP11.96□□□□□ -0.49
CSMD2-205ENST00000373381 EIF4G2P78344 907 aaKnown RBP eCLIP11.95□□□□□ -0.5
CSMD2-205ENST00000373381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSMD2-205ENST00000373381 TMC1Q8TDI8 760 aa11.93□□□□□ -0.5
CSMD2-205ENST00000373381 TMX4Q9H1E5 349 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms