Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RFPL4AP6-201ENST00000616792 846 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 Six3os1_1.1-201ENST00000620900 87 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AP001052.1-201ENST00000626421 99 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AC063952.1-203ENST00000634410 658 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AL121949.2-201ENST00000403446 1548 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 LINC00561-201ENST00000565815 2738 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AOX2P-204ENST00000487742 3284 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC016582.1-202ENST00000636341 2982 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 Y_RNA.159-201ENST00000363674 87 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 RN7SKP47-201ENST00000365347 328 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC005522.1-201ENST00000395416 346 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 SETP9-201ENST00000423837 832 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 GAPDHP57-201ENST00000424400 585 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC099782.1-201ENST00000425889 474 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 RPS27AP6-201ENST00000427962 448 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 NPM1P34-201ENST00000428821 893 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC018638.3-201ENST00000461273 132 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 MRPS17P3-201ENST00000465453 385 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC112206.3-201ENST00000514578 389 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 RNA5SP441-201ENST00000516809 88 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC107953.1-201ENST00000522216 297 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC026956.1-201ENST00000558741 396 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 MIR3135A-201ENST00000578460 77 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 MIR4307-201ENST00000582802 84 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC080078.3-201ENST00000605407 463 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC103710.3-201ENST00000608157 948 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AL122023.1-201ENST00000622847 530 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 AC022400.9-201ENST00000623633 273 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 U6.107-201ENST00000637108 79 ntBASIC9.38□□□□□ -0.91
PHF8Q9UPP1 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PHF8Q9UPP1 LINC00622-201ENST00000562811 1570 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 TNFSF15-201ENST00000374044 2789 ntBASIC9.37□□□□□ -0.91
PHF8Q9UPP1 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC9.37□□□□□ -0.91
PHF8Q9UPP1 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms