RNA–Protein interactions for RNA: ENST00000420434.7

SP140-205, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 3,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-205ENST00000420434 NISCHQ9Y2I1 1504 aa15.33■□□□□ 0.05
SP140-205ENST00000420434 CHIC1Q5VXU3 224 aa14.61□□□□□ -0.07
SP140-205ENST00000420434 AEBP2Q6ZN18 517 aaPredicted RBP14.53□□□□□ -0.08
SP140-205ENST00000420434 DCAF8L2P0C7V8 631 aa13.76□□□□□ -0.21
SP140-205ENST00000420434 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.22
SP140-205ENST00000420434 MYT1Q01538 1121 aa13.68□□□□□ -0.22
SP140-205ENST00000420434 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
SP140-205ENST00000420434 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
SP140-205ENST00000420434 ABCC9O60706 1549 aa13.33□□□□□ -0.28
SP140-205ENST00000420434 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
SP140-205ENST00000420434 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
SP140-205ENST00000420434 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
SP140-205ENST00000420434 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
SP140-205ENST00000420434 APLP2Q06481 763 aa12.87□□□□□ -0.35
SP140-205ENST00000420434 DNAJC5Q9H3Z4 198 aa12.86□□□□□ -0.35
SP140-205ENST00000420434 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
SP140-205ENST00000420434 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
SP140-205ENST00000420434 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
SP140-205ENST00000420434 EHMT2Q96KQ7 1210 aa12.73□□□□□ -0.37
SP140-205ENST00000420434 DNAJC5BQ9UF47 199 aa12.69□□□□□ -0.38
SP140-205ENST00000420434 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
SP140-205ENST00000420434 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
SP140-205ENST00000420434 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
SP140-205ENST00000420434 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
SP140-205ENST00000420434 MYO15BQ96JP2 1530 aa12.49□□□□□ -0.41
SP140-205ENST00000420434 NACADO15069 1562 aa12.48□□□□□ -0.41
SP140-205ENST00000420434 UNC13AQ9UPW8 1703 aa12.42□□□□□ -0.42
SP140-205ENST00000420434 CUX2O14529 1486 aa12.41□□□□□ -0.42
SP140-205ENST00000420434 DCAF1Q9Y4B6 1507 aa12.31□□□□□ -0.44
SP140-205ENST00000420434 HRCP23327 699 aa12.27□□□□□ -0.44
SP140-205ENST00000420434 BCL11AQ9H165 835 aa12.26□□□□□ -0.45
SP140-205ENST00000420434 BICRAQ9NZM4 1560 aa12.25□□□□□ -0.45
SP140-205ENST00000420434 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.46
SP140-205ENST00000420434 KCNA4P22459 653 aa12.19□□□□□ -0.46
SP140-205ENST00000420434 PLPPR3Q6T4P5 718 aa12.15□□□□□ -0.46
SP140-205ENST00000420434 ADRA2BP18089 450 aa12.08□□□□□ -0.48
SP140-205ENST00000420434 CC2D2AQ9P2K1 1620 aa12.07□□□□□ -0.48
SP140-205ENST00000420434 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
SP140-205ENST00000420434 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
SP140-205ENST00000420434 RSF1Q96T23 1441 aaPredicted RBP11.99□□□□□ -0.49
SP140-205ENST00000420434 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
SP140-205ENST00000420434 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
SP140-205ENST00000420434 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
SP140-205ENST00000420434 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
SP140-205ENST00000420434 WIZO95785 1651 aa11.86□□□□□ -0.51
SP140-205ENST00000420434 PPARGC1BQ86YN6 1023 aaKnown RBP11.85□□□□□ -0.51
SP140-205ENST00000420434 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
SP140-205ENST00000420434 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
SP140-205ENST00000420434 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
SP140-205ENST00000420434 SMARCA4P51532 1647 aa11.77□□□□□ -0.53
SP140-205ENST00000420434 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
SP140-205ENST00000420434 BAZ1BQ9UIG0 1483 aaKnown RBP11.75□□□□□ -0.53
SP140-205ENST00000420434 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
SP140-205ENST00000420434 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
SP140-205ENST00000420434 THOC2Q8NI27 1593 aaKnown RBP11.66□□□□□ -0.54
SP140-205ENST00000420434 PPP6R1Q9UPN7 881 aa11.65□□□□□ -0.54
SP140-205ENST00000420434 CCDC88BA6NC98 1476 aa11.65□□□□□ -0.54
SP140-205ENST00000420434 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
SP140-205ENST00000420434 RANGAP1P46060 587 aaPredicted RBP11.6□□□□□ -0.55
SP140-205ENST00000420434 NESP48681 1621 aa11.59□□□□□ -0.55
SP140-205ENST00000420434 SMARCA2P51531 1590 aa11.59□□□□□ -0.55
SP140-205ENST00000420434 ARXQ96QS3 562 aa11.59□□□□□ -0.55
SP140-205ENST00000420434 UBE2Q2Q8WVN8 375 aa11.58□□□□□ -0.56
SP140-205ENST00000420434 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
SP140-205ENST00000420434 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
SP140-205ENST00000420434 LOC105371045A0A1W2PR82 267 aa11.54□□□□□ -0.56
SP140-205ENST00000420434 SENP3Q9H4L4 574 aaPredicted RBP11.54□□□□□ -0.56
SP140-205ENST00000420434 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
SP140-205ENST00000420434 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.57
SP140-205ENST00000420434 TRIM26Q12899 539 aaPredicted RBP11.51□□□□□ -0.57
SP140-205ENST00000420434 ABCC8Q09428 1581 aa11.48□□□□□ -0.57
SP140-205ENST00000420434 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
SP140-205ENST00000420434 CADPSQ9ULU8 1353 aa11.45□□□□□ -0.58
SP140-205ENST00000420434 ANP32EQ9BTT0 268 aa11.43□□□□□ -0.58
SP140-205ENST00000420434 PODXL2Q9NZ53 605 aa11.41□□□□□ -0.58
SP140-205ENST00000420434 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
SP140-205ENST00000420434 HMGXB3Q12766 1538 aa11.4□□□□□ -0.58
SP140-205ENST00000420434 ZBTB22O15209 634 aa11.4□□□□□ -0.59
SP140-205ENST00000420434 PEG3Q9GZU2 1588 aa11.39□□□□□ -0.59
SP140-205ENST00000420434 FBLN2P98095 1184 aa11.38□□□□□ -0.59
SP140-205ENST00000420434 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
SP140-205ENST00000420434 ACIN1Q9UKV3 1341 aaKnown RBP11.34□□□□□ -0.59
SP140-205ENST00000420434 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
SP140-205ENST00000420434 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
SP140-205ENST00000420434 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
SP140-205ENST00000420434 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
SP140-205ENST00000420434 CFTRP13569 1480 aa11.31□□□□□ -0.6
SP140-205ENST00000420434 SOGA1O94964 1423 aa11.29□□□□□ -0.6
SP140-205ENST00000420434 TDRD9Q8NDG6 1382 aaKnown RBP11.29□□□□□ -0.6
SP140-205ENST00000420434 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
SP140-205ENST00000420434 WDR62O43379 1518 aa11.28□□□□□ -0.6
SP140-205ENST00000420434 RUSC2Q8N2Y8 1516 aa11.27□□□□□ -0.6
SP140-205ENST00000420434 RIMBP3CA6NJZ7 1639 aa11.26□□□□□ -0.61
SP140-205ENST00000420434 RIMBP3BA6NNM3 1639 aa11.26□□□□□ -0.61
SP140-205ENST00000420434 RIMBP3Q9UFD9 1639 aa11.26□□□□□ -0.61
SP140-205ENST00000420434 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
SP140-205ENST00000420434 TIMELESSQ9UNS1 1208 aa11.26□□□□□ -0.61
SP140-205ENST00000420434 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
SP140-205ENST00000420434 PKNOX2Q96KN3 472 aa11.24□□□□□ -0.61
SP140-205ENST00000420434 CEP164Q9UPV0 1460 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms