RNA–Protein interactions for RNA: ENST00000517529.1

SMG1P4-203, Transcript of SMG1 pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene SMG1P4, Length 1,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-203ENST00000517529 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
SMG1P4-203ENST00000517529 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
SMG1P4-203ENST00000517529 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
SMG1P4-203ENST00000517529 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
SMG1P4-203ENST00000517529 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
SMG1P4-203ENST00000517529 FOXD1Q16676 465 aa16.21■□□□□ 0.18
SMG1P4-203ENST00000517529 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
SMG1P4-203ENST00000517529 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
SMG1P4-203ENST00000517529 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
SMG1P4-203ENST00000517529 ADRA2BP18089 450 aa15.24■□□□□ 0.03
SMG1P4-203ENST00000517529 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
SMG1P4-203ENST00000517529 MSH5O43196 834 aa15.18■□□□□ 0.02
SMG1P4-203ENST00000517529 ABCC9O60706 1549 aa14.3□□□□□ -0.12
SMG1P4-203ENST00000517529 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
SMG1P4-203ENST00000517529 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
SMG1P4-203ENST00000517529 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
SMG1P4-203ENST00000517529 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
SMG1P4-203ENST00000517529 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
SMG1P4-203ENST00000517529 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
SMG1P4-203ENST00000517529 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
SMG1P4-203ENST00000517529 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
SMG1P4-203ENST00000517529 RB1CC1Q8TDY2 1594 aa13.51□□□□□ -0.25
SMG1P4-203ENST00000517529 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
SMG1P4-203ENST00000517529 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
SMG1P4-203ENST00000517529 RNF216Q9NWF9 866 aaPredicted RBP13.4□□□□□ -0.26
SMG1P4-203ENST00000517529 NACADO15069 1562 aa13.36□□□□□ -0.27
SMG1P4-203ENST00000517529 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
SMG1P4-203ENST00000517529 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
SMG1P4-203ENST00000517529 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMG1P4-203ENST00000517529 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
SMG1P4-203ENST00000517529 BICRAQ9NZM4 1560 aa13.19□□□□□ -0.3
SMG1P4-203ENST00000517529 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
SMG1P4-203ENST00000517529 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
SMG1P4-203ENST00000517529 KCNA4P22459 653 aa13.05□□□□□ -0.32
SMG1P4-203ENST00000517529 ZCCHC6Q5VYS8 1495 aaKnown RBP12.93□□□□□ -0.34
SMG1P4-203ENST00000517529 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
SMG1P4-203ENST00000517529 CC2D2AQ9P2K1 1620 aa12.93□□□□□ -0.34
SMG1P4-203ENST00000517529 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
SMG1P4-203ENST00000517529 DCAF1Q9Y4B6 1507 aa12.89□□□□□ -0.35
SMG1P4-203ENST00000517529 CECR2Q9BXF3 1484 aa12.88□□□□□ -0.35
SMG1P4-203ENST00000517529 SCRIBQ14160 1630 aa12.87□□□□□ -0.35
SMG1P4-203ENST00000517529 EIF4G1Q04637 1599 aaKnown RBP12.84□□□□□ -0.35
SMG1P4-203ENST00000517529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMG1P4-203ENST00000517529 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
SMG1P4-203ENST00000517529 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
SMG1P4-203ENST00000517529 POTEHQ6S545 545 aa12.62□□□□□ -0.39
SMG1P4-203ENST00000517529 MYT1Q01538 1121 aa12.58□□□□□ -0.4
SMG1P4-203ENST00000517529 DNAJC5Q9H3Z4 198 aa12.57□□□□□ -0.4
SMG1P4-203ENST00000517529 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
SMG1P4-203ENST00000517529 SLC4A2P04920 1241 aa12.5□□□□□ -0.41
SMG1P4-203ENST00000517529 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
SMG1P4-203ENST00000517529 CUX2O14529 1486 aa12.37□□□□□ -0.43
SMG1P4-203ENST00000517529 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
SMG1P4-203ENST00000517529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.34□□□□□ -0.43
SMG1P4-203ENST00000517529 HNRNPUL2Q1KMD3 747 aaKnown RBP12.34□□□□□ -0.43
SMG1P4-203ENST00000517529 APLP2Q06481 763 aa12.32□□□□□ -0.44
SMG1P4-203ENST00000517529 ERCC6Q03468 1493 aa12.32□□□□□ -0.44
SMG1P4-203ENST00000517529 ATAD2BQ9ULI0 1458 aa12.29□□□□□ -0.44
SMG1P4-203ENST00000517529 CAPN15O75808 1086 aa12.29□□□□□ -0.44
SMG1P4-203ENST00000517529 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.44
SMG1P4-203ENST00000517529 NESP48681 1621 aa12.26□□□□□ -0.45
SMG1P4-203ENST00000517529 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
SMG1P4-203ENST00000517529 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
SMG1P4-203ENST00000517529 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
SMG1P4-203ENST00000517529 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
SMG1P4-203ENST00000517529 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
SMG1P4-203ENST00000517529 THOC2Q8NI27 1593 aaKnown RBP12.18□□□□□ -0.46
SMG1P4-203ENST00000517529 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
SMG1P4-203ENST00000517529 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
SMG1P4-203ENST00000517529 DSG3P32926 999 aa12.15□□□□□ -0.46
SMG1P4-203ENST00000517529 BAZ1BQ9UIG0 1483 aaKnown RBP12.15□□□□□ -0.46
SMG1P4-203ENST00000517529 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
SMG1P4-203ENST00000517529 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
SMG1P4-203ENST00000517529 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
SMG1P4-203ENST00000517529 KIF21AQ7Z4S6 1674 aa12.11□□□□□ -0.47
SMG1P4-203ENST00000517529 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
SMG1P4-203ENST00000517529 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
SMG1P4-203ENST00000517529 MROH2BQ7Z745 1585 aa12.07□□□□□ -0.48
SMG1P4-203ENST00000517529 ABCB7O75027 752 aa12□□□□□ -0.49
SMG1P4-203ENST00000517529 PDS5BQ9NTI5 1447 aa11.99□□□□□ -0.49
SMG1P4-203ENST00000517529 ZBTB22O15209 634 aa11.97□□□□□ -0.49
SMG1P4-203ENST00000517529 HRCP23327 699 aa11.96□□□□□ -0.49
SMG1P4-203ENST00000517529 WDR62O43379 1518 aa11.95□□□□□ -0.5
SMG1P4-203ENST00000517529 CADPSQ9ULU8 1353 aa11.94□□□□□ -0.5
SMG1P4-203ENST00000517529 MRC2Q9UBG0 1479 aa11.94□□□□□ -0.5
SMG1P4-203ENST00000517529 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
SMG1P4-203ENST00000517529 WIZO95785 1651 aa11.93□□□□□ -0.5
SMG1P4-203ENST00000517529 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
SMG1P4-203ENST00000517529 POLA2Q14181 598 aa11.84□□□□□ -0.51
SMG1P4-203ENST00000517529 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
SMG1P4-203ENST00000517529 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
SMG1P4-203ENST00000517529 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
SMG1P4-203ENST00000517529 CFTRP13569 1480 aa11.79□□□□□ -0.52
SMG1P4-203ENST00000517529 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
SMG1P4-203ENST00000517529 OSCARQ8IYS5 282 aa11.74□□□□□ -0.53
SMG1P4-203ENST00000517529 TOP2AP11388 1531 aaKnown RBP11.73□□□□□ -0.53
SMG1P4-203ENST00000517529 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
SMG1P4-203ENST00000517529 ZBTB12Q9Y330 459 aaPredicted RBP11.71□□□□□ -0.54
SMG1P4-203ENST00000517529 PRDM2Q13029 1718 aa11.7□□□□□ -0.54
SMG1P4-203ENST00000517529 RIMBP3CA6NJZ7 1639 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms