RNA–Protein interactions for RNA: ENST00000547963.1

LINC01234-202, Transcript of long intergenic non-protein coding RNA 1234, humanhuman

TSL 2 BASIC

Gene LINC01234, Length 2,088 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01234-202ENST00000547963 NISCHQ9Y2I1 1504 aa14.92□□□□□ -0.02
LINC01234-202ENST00000547963 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
LINC01234-202ENST00000547963 HRCP23327 699 aa14.59□□□□□ -0.07
LINC01234-202ENST00000547963 MYT1Q01538 1121 aa14.24□□□□□ -0.13
LINC01234-202ENST00000547963 PPARGC1BQ86YN6 1023 aaKnown RBP14.23□□□□□ -0.13
LINC01234-202ENST00000547963 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
LINC01234-202ENST00000547963 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
LINC01234-202ENST00000547963 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
LINC01234-202ENST00000547963 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
LINC01234-202ENST00000547963 CCDC180Q9P1Z9 1646 aa13.66□□□□□ -0.22
LINC01234-202ENST00000547963 ACIN1Q9UKV3 1341 aaKnown RBP13.55□□□□□ -0.24
LINC01234-202ENST00000547963 TTBK1Q5TCY1 1321 aaPredicted RBP13.54□□□□□ -0.24
LINC01234-202ENST00000547963 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.24
LINC01234-202ENST00000547963 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
LINC01234-202ENST00000547963 NEUROD1Q13562 356 aa13.49□□□□□ -0.25
LINC01234-202ENST00000547963 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
LINC01234-202ENST00000547963 TRIM26Q12899 539 aaPredicted RBP13.46□□□□□ -0.26
LINC01234-202ENST00000547963 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
LINC01234-202ENST00000547963 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
LINC01234-202ENST00000547963 BCL11AQ9H165 835 aa13.31□□□□□ -0.28
LINC01234-202ENST00000547963 CENPBP07199 599 aaPredicted RBP13.24□□□□□ -0.29
LINC01234-202ENST00000547963 FAM9AQ8IZU1 332 aaPredicted RBP13.22□□□□□ -0.29
LINC01234-202ENST00000547963 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
LINC01234-202ENST00000547963 PRKCSHP14314 528 aaPredicted RBP13.15□□□□□ -0.3
LINC01234-202ENST00000547963 DIEXFQ68CQ4 756 aaKnown RBP13.03□□□□□ -0.32
LINC01234-202ENST00000547963 ANP32EQ9BTT0 268 aa13.01□□□□□ -0.33
LINC01234-202ENST00000547963 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
LINC01234-202ENST00000547963 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
LINC01234-202ENST00000547963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
LINC01234-202ENST00000547963 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
LINC01234-202ENST00000547963 ZCCHC6Q5VYS8 1495 aaKnown RBP12.81□□□□□ -0.36
LINC01234-202ENST00000547963 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
LINC01234-202ENST00000547963 CCER1Q8TC90 406 aaPredicted RBP12.76□□□□□ -0.37
LINC01234-202ENST00000547963 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
LINC01234-202ENST00000547963 APLP2Q06481 763 aa12.74□□□□□ -0.37
LINC01234-202ENST00000547963 SUPT16HQ9Y5B9 1047 aaKnown RBP12.71□□□□□ -0.37
LINC01234-202ENST00000547963 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
LINC01234-202ENST00000547963 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
LINC01234-202ENST00000547963 MIER1Q8N108 512 aa12.67□□□□□ -0.38
LINC01234-202ENST00000547963 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
LINC01234-202ENST00000547963 RBM19Q9Y4C8 960 aaKnown RBP12.41□□□□□ -0.42
LINC01234-202ENST00000547963 MSH5O43196 834 aa12.4□□□□□ -0.42
LINC01234-202ENST00000547963 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
LINC01234-202ENST00000547963 WRNQ14191 1432 aaPredicted RBP eCLIP12.31□□□□□ -0.44
LINC01234-202ENST00000547963 ABCC9O60706 1549 aa12.31□□□□□ -0.44
LINC01234-202ENST00000547963 BCANQ96GW7 911 aa12.29□□□□□ -0.44
LINC01234-202ENST00000547963 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
LINC01234-202ENST00000547963 DEKP35659 375 aaKnown RBP12.25□□□□□ -0.45
LINC01234-202ENST00000547963 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
LINC01234-202ENST00000547963 SALL2Q9Y467 1007 aaPredicted RBP12.25□□□□□ -0.45
LINC01234-202ENST00000547963 UBE2Q2Q8WVN8 375 aa12.23□□□□□ -0.45
LINC01234-202ENST00000547963 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
LINC01234-202ENST00000547963 FKBP8Q14318 412 aa12.21□□□□□ -0.45
LINC01234-202ENST00000547963 ERICH6BQ5W0A0 696 aa12.18□□□□□ -0.46
LINC01234-202ENST00000547963 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
LINC01234-202ENST00000547963 RSF1Q96T23 1441 aaPredicted RBP12.14□□□□□ -0.47
LINC01234-202ENST00000547963 ITGAEP38570 1179 aa12.11□□□□□ -0.47
LINC01234-202ENST00000547963 KCNH8Q96L42 1107 aa12.1□□□□□ -0.47
LINC01234-202ENST00000547963 CEP162Q5TB80 1403 aa12.1□□□□□ -0.47
LINC01234-202ENST00000547963 DCAF8L2P0C7V8 631 aa12.07□□□□□ -0.48
LINC01234-202ENST00000547963 NEFLP07196 543 aa12.04□□□□□ -0.48
LINC01234-202ENST00000547963 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
LINC01234-202ENST00000547963 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
LINC01234-202ENST00000547963 IL27Q8NEV9 243 aa12.01□□□□□ -0.49
LINC01234-202ENST00000547963 EIF4G1Q04637 1599 aaKnown RBP11.99□□□□□ -0.49
LINC01234-202ENST00000547963 TNIKQ9UKE5 1360 aa11.97□□□□□ -0.49
LINC01234-202ENST00000547963 DHX57Q6P158 1386 aaKnown RBP11.95□□□□□ -0.5
LINC01234-202ENST00000547963 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
LINC01234-202ENST00000547963 NBR1Q14596 966 aa11.93□□□□□ -0.5
LINC01234-202ENST00000547963 NACADO15069 1562 aa11.93□□□□□ -0.5
LINC01234-202ENST00000547963 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
LINC01234-202ENST00000547963 NOP58Q9Y2X3 529 aaKnown RBP11.91□□□□□ -0.5
LINC01234-202ENST00000547963 EIF5BO60841 1220 aaKnown RBP11.91□□□□□ -0.5
LINC01234-202ENST00000547963 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.51
LINC01234-202ENST00000547963 PKNOX2Q96KN3 472 aa11.9□□□□□ -0.51
LINC01234-202ENST00000547963 ABCC8Q09428 1581 aa11.88□□□□□ -0.51
LINC01234-202ENST00000547963 TRIM52Q96A61 297 aa11.85□□□□□ -0.51
LINC01234-202ENST00000547963 CCDC88BA6NC98 1476 aa11.82□□□□□ -0.52
LINC01234-202ENST00000547963 WASHC2AQ641Q2 1341 aa11.8□□□□□ -0.52
LINC01234-202ENST00000547963 C11orf95C9JLR9 678 aaPredicted RBP11.79□□□□□ -0.52
LINC01234-202ENST00000547963 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
LINC01234-202ENST00000547963 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
LINC01234-202ENST00000547963 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
LINC01234-202ENST00000547963 SOGA1O94964 1423 aa11.78□□□□□ -0.52
LINC01234-202ENST00000547963 GOLGA3Q08378 1498 aa11.76□□□□□ -0.53
LINC01234-202ENST00000547963 PPP1R15AO75807 674 aaPredicted RBP11.75□□□□□ -0.53
LINC01234-202ENST00000547963 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
LINC01234-202ENST00000547963 SCRIBQ14160 1630 aa11.75□□□□□ -0.53
LINC01234-202ENST00000547963 WASHC2CQ9Y4E1 1318 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 WIZO95785 1651 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 EEA1Q15075 1411 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 VPS8Q8N3P4 1428 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 CLIP1P30622 1438 aa11.73□□□□□ -0.53
LINC01234-202ENST00000547963 RUSC2Q8N2Y8 1516 aa11.72□□□□□ -0.53
LINC01234-202ENST00000547963 CUX2O14529 1486 aa11.72□□□□□ -0.53
LINC01234-202ENST00000547963 WDR97A6NE52 1622 aa11.72□□□□□ -0.53
LINC01234-202ENST00000547963 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
LINC01234-202ENST00000547963 IPO9Q96P70 1041 aaKnown RBP11.71□□□□□ -0.53
LINC01234-202ENST00000547963 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms