RNA–Protein interactions for RNA: ENST00000547963.1

LINC01234-202, Transcript of long intergenic non-protein coding RNA 1234, humanhuman

TSL 2 BASIC

Gene LINC01234, Length 2,088 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01234-202ENST00000547963 NISCHQ9Y2I1 1504 aa14.92□□□□□ -0.02
LINC01234-202ENST00000547963 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
LINC01234-202ENST00000547963 HRCP23327 699 aa14.59□□□□□ -0.07
LINC01234-202ENST00000547963 MYT1Q01538 1121 aa14.24□□□□□ -0.13
LINC01234-202ENST00000547963 PPARGC1BQ86YN6 1023 aaKnown RBP14.23□□□□□ -0.13
LINC01234-202ENST00000547963 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
LINC01234-202ENST00000547963 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
LINC01234-202ENST00000547963 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
LINC01234-202ENST00000547963 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
LINC01234-202ENST00000547963 CCDC180Q9P1Z9 1646 aa13.66□□□□□ -0.22
LINC01234-202ENST00000547963 ACIN1Q9UKV3 1341 aaKnown RBP13.55□□□□□ -0.24
LINC01234-202ENST00000547963 TTBK1Q5TCY1 1321 aaPredicted RBP13.54□□□□□ -0.24
LINC01234-202ENST00000547963 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.24
LINC01234-202ENST00000547963 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
LINC01234-202ENST00000547963 NEUROD1Q13562 356 aa13.49□□□□□ -0.25
LINC01234-202ENST00000547963 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
LINC01234-202ENST00000547963 TRIM26Q12899 539 aaPredicted RBP13.46□□□□□ -0.26
LINC01234-202ENST00000547963 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
LINC01234-202ENST00000547963 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
LINC01234-202ENST00000547963 BCL11AQ9H165 835 aa13.31□□□□□ -0.28
LINC01234-202ENST00000547963 CENPBP07199 599 aaPredicted RBP13.24□□□□□ -0.29
LINC01234-202ENST00000547963 FAM9AQ8IZU1 332 aaPredicted RBP13.22□□□□□ -0.29
LINC01234-202ENST00000547963 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
LINC01234-202ENST00000547963 PRKCSHP14314 528 aaPredicted RBP13.15□□□□□ -0.3
LINC01234-202ENST00000547963 DIEXFQ68CQ4 756 aaKnown RBP13.03□□□□□ -0.32
LINC01234-202ENST00000547963 ANP32EQ9BTT0 268 aa13.01□□□□□ -0.33
LINC01234-202ENST00000547963 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
LINC01234-202ENST00000547963 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
LINC01234-202ENST00000547963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
LINC01234-202ENST00000547963 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
LINC01234-202ENST00000547963 ZCCHC6Q5VYS8 1495 aaKnown RBP12.81□□□□□ -0.36
LINC01234-202ENST00000547963 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
LINC01234-202ENST00000547963 CCER1Q8TC90 406 aaPredicted RBP12.76□□□□□ -0.37
LINC01234-202ENST00000547963 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
LINC01234-202ENST00000547963 APLP2Q06481 763 aa12.74□□□□□ -0.37
LINC01234-202ENST00000547963 SUPT16HQ9Y5B9 1047 aaKnown RBP12.71□□□□□ -0.37
LINC01234-202ENST00000547963 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
LINC01234-202ENST00000547963 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
LINC01234-202ENST00000547963 MIER1Q8N108 512 aa12.67□□□□□ -0.38
LINC01234-202ENST00000547963 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
LINC01234-202ENST00000547963 RBM19Q9Y4C8 960 aaKnown RBP12.41□□□□□ -0.42
LINC01234-202ENST00000547963 MSH5O43196 834 aa12.4□□□□□ -0.42
LINC01234-202ENST00000547963 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
LINC01234-202ENST00000547963 WRNQ14191 1432 aaPredicted RBP eCLIP12.31□□□□□ -0.44
LINC01234-202ENST00000547963 ABCC9O60706 1549 aa12.31□□□□□ -0.44
LINC01234-202ENST00000547963 BCANQ96GW7 911 aa12.29□□□□□ -0.44
LINC01234-202ENST00000547963 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
LINC01234-202ENST00000547963 DEKP35659 375 aaKnown RBP12.25□□□□□ -0.45
LINC01234-202ENST00000547963 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
LINC01234-202ENST00000547963 SALL2Q9Y467 1007 aaPredicted RBP12.25□□□□□ -0.45
LINC01234-202ENST00000547963 UBE2Q2Q8WVN8 375 aa12.23□□□□□ -0.45
LINC01234-202ENST00000547963 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
LINC01234-202ENST00000547963 FKBP8Q14318 412 aa12.21□□□□□ -0.45
LINC01234-202ENST00000547963 ERICH6BQ5W0A0 696 aa12.18□□□□□ -0.46
LINC01234-202ENST00000547963 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
LINC01234-202ENST00000547963 RSF1Q96T23 1441 aaPredicted RBP12.14□□□□□ -0.47
LINC01234-202ENST00000547963 ITGAEP38570 1179 aa12.11□□□□□ -0.47
LINC01234-202ENST00000547963 KCNH8Q96L42 1107 aa12.1□□□□□ -0.47
LINC01234-202ENST00000547963 CEP162Q5TB80 1403 aa12.1□□□□□ -0.47
LINC01234-202ENST00000547963 DCAF8L2P0C7V8 631 aa12.07□□□□□ -0.48
LINC01234-202ENST00000547963 NEFLP07196 543 aa12.04□□□□□ -0.48
LINC01234-202ENST00000547963 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
LINC01234-202ENST00000547963 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
LINC01234-202ENST00000547963 IL27Q8NEV9 243 aa12.01□□□□□ -0.49
LINC01234-202ENST00000547963 EIF4G1Q04637 1599 aaKnown RBP11.99□□□□□ -0.49
LINC01234-202ENST00000547963 TNIKQ9UKE5 1360 aa11.97□□□□□ -0.49
LINC01234-202ENST00000547963 DHX57Q6P158 1386 aaKnown RBP11.95□□□□□ -0.5
LINC01234-202ENST00000547963 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
LINC01234-202ENST00000547963 NBR1Q14596 966 aa11.93□□□□□ -0.5
LINC01234-202ENST00000547963 NACADO15069 1562 aa11.93□□□□□ -0.5
LINC01234-202ENST00000547963 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
LINC01234-202ENST00000547963 NOP58Q9Y2X3 529 aaKnown RBP11.91□□□□□ -0.5
LINC01234-202ENST00000547963 EIF5BO60841 1220 aaKnown RBP11.91□□□□□ -0.5
LINC01234-202ENST00000547963 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.51
LINC01234-202ENST00000547963 PKNOX2Q96KN3 472 aa11.9□□□□□ -0.51
LINC01234-202ENST00000547963 ABCC8Q09428 1581 aa11.88□□□□□ -0.51
LINC01234-202ENST00000547963 TRIM52Q96A61 297 aa11.85□□□□□ -0.51
LINC01234-202ENST00000547963 CCDC88BA6NC98 1476 aa11.82□□□□□ -0.52
LINC01234-202ENST00000547963 WASHC2AQ641Q2 1341 aa11.8□□□□□ -0.52
LINC01234-202ENST00000547963 C11orf95C9JLR9 678 aaPredicted RBP11.79□□□□□ -0.52
LINC01234-202ENST00000547963 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
LINC01234-202ENST00000547963 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
LINC01234-202ENST00000547963 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
LINC01234-202ENST00000547963 SOGA1O94964 1423 aa11.78□□□□□ -0.52
LINC01234-202ENST00000547963 GOLGA3Q08378 1498 aa11.76□□□□□ -0.53
LINC01234-202ENST00000547963 PPP1R15AO75807 674 aaPredicted RBP11.75□□□□□ -0.53
LINC01234-202ENST00000547963 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
LINC01234-202ENST00000547963 SCRIBQ14160 1630 aa11.75□□□□□ -0.53
LINC01234-202ENST00000547963 WASHC2CQ9Y4E1 1318 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 WIZO95785 1651 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 EEA1Q15075 1411 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 VPS8Q8N3P4 1428 aa11.74□□□□□ -0.53
LINC01234-202ENST00000547963 CLIP1P30622 1438 aa11.73□□□□□ -0.53
LINC01234-202ENST00000547963 RUSC2Q8N2Y8 1516 aa11.72□□□□□ -0.53
LINC01234-202ENST00000547963 CUX2O14529 1486 aa11.72□□□□□ -0.53
LINC01234-202ENST00000547963 WDR97A6NE52 1622 aa11.72□□□□□ -0.53
LINC01234-202ENST00000547963 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
LINC01234-202ENST00000547963 IPO9Q96P70 1041 aaKnown RBP11.71□□□□□ -0.53
LINC01234-202ENST00000547963 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms