RNA–Protein interactions for RNA: ENST00000317501.7

NTRK3-201, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 1 (best) BASIC

Gene NTRK3, Length 3,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-201ENST00000317501 NISCHQ9Y2I1 1504 aa16.16■□□□□ 0.18
NTRK3-201ENST00000317501 HRCP23327 699 aa14.13□□□□□ -0.15
NTRK3-201ENST00000317501 SHROOM4Q9ULL8 1493 aa13.91□□□□□ -0.18
NTRK3-201ENST00000317501 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
NTRK3-201ENST00000317501 SUPT5HO00267 1087 aaKnown RBP13.84□□□□□ -0.19
NTRK3-201ENST00000317501 ZCCHC6Q5VYS8 1495 aaKnown RBP13.78□□□□□ -0.2
NTRK3-201ENST00000317501 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
NTRK3-201ENST00000317501 DCAF1Q9Y4B6 1507 aa13.72□□□□□ -0.21
NTRK3-201ENST00000317501 PCGF6Q9BYE7 350 aa13.72□□□□□ -0.21
NTRK3-201ENST00000317501 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
NTRK3-201ENST00000317501 PPARGC1BQ86YN6 1023 aaKnown RBP13.65□□□□□ -0.22
NTRK3-201ENST00000317501 CCDC180Q9P1Z9 1646 aa13.63□□□□□ -0.23
NTRK3-201ENST00000317501 TRIM26Q12899 539 aaPredicted RBP13.45□□□□□ -0.26
NTRK3-201ENST00000317501 ZEB1P37275 1124 aaPredicted RBP13.4□□□□□ -0.26
NTRK3-201ENST00000317501 LOC105371045A0A1W2PR82 267 aa13.3□□□□□ -0.28
NTRK3-201ENST00000317501 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
NTRK3-201ENST00000317501 MYT1Q01538 1121 aa13.17□□□□□ -0.3
NTRK3-201ENST00000317501 ABCC9O60706 1549 aa13.11□□□□□ -0.31
NTRK3-201ENST00000317501 DCAF8L2P0C7V8 631 aa13.03□□□□□ -0.32
NTRK3-201ENST00000317501 ACIN1Q9UKV3 1341 aaKnown RBP13.01□□□□□ -0.33
NTRK3-201ENST00000317501 RB1CC1Q8TDY2 1594 aa12.92□□□□□ -0.34
NTRK3-201ENST00000317501 RSF1Q96T23 1441 aaPredicted RBP12.92□□□□□ -0.34
NTRK3-201ENST00000317501 TRIM41Q8WV44 630 aa12.91□□□□□ -0.34
NTRK3-201ENST00000317501 NEUROD1Q13562 356 aa12.9□□□□□ -0.34
NTRK3-201ENST00000317501 CENPBP07199 599 aaPredicted RBP12.87□□□□□ -0.35
NTRK3-201ENST00000317501 GTF3C3Q9Y5Q9 886 aa12.82□□□□□ -0.36
NTRK3-201ENST00000317501 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
NTRK3-201ENST00000317501 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
NTRK3-201ENST00000317501 FAM9AQ8IZU1 332 aaPredicted RBP12.74□□□□□ -0.37
NTRK3-201ENST00000317501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
NTRK3-201ENST00000317501 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
NTRK3-201ENST00000317501 WRNQ14191 1432 aaPredicted RBP eCLIP12.69□□□□□ -0.38
NTRK3-201ENST00000317501 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
NTRK3-201ENST00000317501 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
NTRK3-201ENST00000317501 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
NTRK3-201ENST00000317501 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
NTRK3-201ENST00000317501 BAZ1AQ9NRL2 1556 aaPredicted RBP12.55□□□□□ -0.4
NTRK3-201ENST00000317501 WIZO95785 1651 aa12.53□□□□□ -0.4
NTRK3-201ENST00000317501 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
NTRK3-201ENST00000317501 CEP162Q5TB80 1403 aa12.5□□□□□ -0.41
NTRK3-201ENST00000317501 TNIKQ9UKE5 1360 aa12.48□□□□□ -0.41
NTRK3-201ENST00000317501 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
NTRK3-201ENST00000317501 NACADO15069 1562 aa12.45□□□□□ -0.42
NTRK3-201ENST00000317501 EEA1Q15075 1411 aa12.43□□□□□ -0.42
NTRK3-201ENST00000317501 MIER1Q8N108 512 aa12.43□□□□□ -0.42
NTRK3-201ENST00000317501 YTHDC1Q96MU7 727 aaKnown RBP12.42□□□□□ -0.42
NTRK3-201ENST00000317501 CCDC88BA6NC98 1476 aa12.39□□□□□ -0.43
NTRK3-201ENST00000317501 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
NTRK3-201ENST00000317501 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
NTRK3-201ENST00000317501 TTBK1Q5TCY1 1321 aaPredicted RBP12.37□□□□□ -0.43
NTRK3-201ENST00000317501 GOLGA3Q08378 1498 aa12.33□□□□□ -0.44
NTRK3-201ENST00000317501 SOGA1O94964 1423 aa12.31□□□□□ -0.44
NTRK3-201ENST00000317501 SMARCA2P51531 1590 aa12.31□□□□□ -0.44
NTRK3-201ENST00000317501 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
NTRK3-201ENST00000317501 SUPT16HQ9Y5B9 1047 aaKnown RBP12.28□□□□□ -0.44
NTRK3-201ENST00000317501 KIF21BO75037 1637 aa12.27□□□□□ -0.44
NTRK3-201ENST00000317501 ANP32EQ9BTT0 268 aa12.24□□□□□ -0.45
NTRK3-201ENST00000317501 SMARCA4P51532 1647 aa12.24□□□□□ -0.45
NTRK3-201ENST00000317501 RUSC2Q8N2Y8 1516 aa12.23□□□□□ -0.45
NTRK3-201ENST00000317501 CEP164Q9UPV0 1460 aa12.22□□□□□ -0.45
NTRK3-201ENST00000317501 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
NTRK3-201ENST00000317501 TSHZ2Q9NRE2 1034 aa12.21□□□□□ -0.45
NTRK3-201ENST00000317501 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
NTRK3-201ENST00000317501 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
NTRK3-201ENST00000317501 HNRNPUL2Q1KMD3 747 aaKnown RBP12.19□□□□□ -0.46
NTRK3-201ENST00000317501 CLIP1P30622 1438 aa12.16□□□□□ -0.46
NTRK3-201ENST00000317501 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
NTRK3-201ENST00000317501 BCL11AQ9H165 835 aa12.12□□□□□ -0.47
NTRK3-201ENST00000317501 SYNJ1O43426 1573 aa12.08□□□□□ -0.48
NTRK3-201ENST00000317501 CUX2O14529 1486 aa12.07□□□□□ -0.48
NTRK3-201ENST00000317501 APLP2Q06481 763 aa12.06□□□□□ -0.48
NTRK3-201ENST00000317501 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
NTRK3-201ENST00000317501 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
NTRK3-201ENST00000317501 RAPGEF2Q9Y4G8 1499 aa12.02□□□□□ -0.49
NTRK3-201ENST00000317501 RRBP1Q9P2E9 1410 aaKnown RBP12.01□□□□□ -0.49
NTRK3-201ENST00000317501 ERICH3Q5RHP9 1530 aa11.99□□□□□ -0.49
NTRK3-201ENST00000317501 ARAP1Q96P48 1450 aa11.96□□□□□ -0.5
NTRK3-201ENST00000317501 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
NTRK3-201ENST00000317501 RBM19Q9Y4C8 960 aaKnown RBP11.92□□□□□ -0.5
NTRK3-201ENST00000317501 BIVM-ERCC5R4GMW8 1640 aa11.92□□□□□ -0.5
NTRK3-201ENST00000317501 FKBP8Q14318 412 aa11.91□□□□□ -0.5
NTRK3-201ENST00000317501 MAPKBP1O60336 1514 aa11.91□□□□□ -0.5
NTRK3-201ENST00000317501 PRXQ9BXM0 1461 aa11.9□□□□□ -0.5
NTRK3-201ENST00000317501 KCNH8Q96L42 1107 aa11.89□□□□□ -0.51
NTRK3-201ENST00000317501 CCNB3Q8WWL7 1395 aa11.88□□□□□ -0.51
NTRK3-201ENST00000317501 NEFLP07196 543 aa11.86□□□□□ -0.51
NTRK3-201ENST00000317501 BCANQ96GW7 911 aa11.86□□□□□ -0.51
NTRK3-201ENST00000317501 KANK4Q5T7N3 995 aaPredicted RBP11.86□□□□□ -0.51
NTRK3-201ENST00000317501 CCER2I3L3R5 266 aa11.85□□□□□ -0.51
NTRK3-201ENST00000317501 WDR97A6NE52 1622 aa11.83□□□□□ -0.52
NTRK3-201ENST00000317501 FANCIQ9NVI1 1328 aa11.83□□□□□ -0.52
NTRK3-201ENST00000317501 MAP3K1Q13233 1512 aa11.82□□□□□ -0.52
NTRK3-201ENST00000317501 PPP1R15AO75807 674 aaPredicted RBP11.82□□□□□ -0.52
NTRK3-201ENST00000317501 RAB3GAP2Q9H2M9 1393 aa11.82□□□□□ -0.52
NTRK3-201ENST00000317501 TIMELESSQ9UNS1 1208 aa11.81□□□□□ -0.52
NTRK3-201ENST00000317501 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
NTRK3-201ENST00000317501 MSH5O43196 834 aa11.79□□□□□ -0.52
NTRK3-201ENST00000317501 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
NTRK3-201ENST00000317501 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
NTRK3-201ENST00000317501 ATAD2BQ9ULI0 1458 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms