RNA–Protein interactions for RNA: ENST00000365347.1

RN7SKP47-201, Transcript of RNA, 7SK small nuclear pseudogene 47, humanhuman

BASIC

Gene RN7SKP47, Length 328 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP47-201ENST00000365347 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
RN7SKP47-201ENST00000365347 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
RN7SKP47-201ENST00000365347 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
RN7SKP47-201ENST00000365347 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
RN7SKP47-201ENST00000365347 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
RN7SKP47-201ENST00000365347 FOXD1Q16676 465 aa16.06■□□□□ 0.16
RN7SKP47-201ENST00000365347 NISCHQ9Y2I1 1504 aa15.97■□□□□ 0.15
RN7SKP47-201ENST00000365347 MSH5O43196 834 aa15.27■□□□□ 0.04
RN7SKP47-201ENST00000365347 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.05
RN7SKP47-201ENST00000365347 PIAS4Q8N2W9 510 aaPredicted RBP14.66□□□□□ -0.06
RN7SKP47-201ENST00000365347 PPP6R1Q9UPN7 881 aa14.57□□□□□ -0.08
RN7SKP47-201ENST00000365347 ADRA2BP18089 450 aa14.49□□□□□ -0.09
RN7SKP47-201ENST00000365347 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
RN7SKP47-201ENST00000365347 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
RN7SKP47-201ENST00000365347 ZCCHC6Q5VYS8 1495 aaKnown RBP13.37□□□□□ -0.27
RN7SKP47-201ENST00000365347 MAPK8IP2Q13387 824 aaPredicted RBP13.36□□□□□ -0.27
RN7SKP47-201ENST00000365347 ABCC9O60706 1549 aa13.34□□□□□ -0.27
RN7SKP47-201ENST00000365347 DMRT2Q9Y5R5 561 aa13.33□□□□□ -0.28
RN7SKP47-201ENST00000365347 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
RN7SKP47-201ENST00000365347 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
RN7SKP47-201ENST00000365347 DCAF1Q9Y4B6 1507 aa13.21□□□□□ -0.29
RN7SKP47-201ENST00000365347 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
RN7SKP47-201ENST00000365347 NACADO15069 1562 aa13.07□□□□□ -0.32
RN7SKP47-201ENST00000365347 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
RN7SKP47-201ENST00000365347 RB1CC1Q8TDY2 1594 aa12.98□□□□□ -0.33
RN7SKP47-201ENST00000365347 POTEHQ6S545 545 aa12.94□□□□□ -0.34
RN7SKP47-201ENST00000365347 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
RN7SKP47-201ENST00000365347 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
RN7SKP47-201ENST00000365347 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
RN7SKP47-201ENST00000365347 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
RN7SKP47-201ENST00000365347 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
RN7SKP47-201ENST00000365347 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
RN7SKP47-201ENST00000365347 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
RN7SKP47-201ENST00000365347 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
RN7SKP47-201ENST00000365347 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP47-201ENST00000365347 BICRAQ9NZM4 1560 aa12.57□□□□□ -0.4
RN7SKP47-201ENST00000365347 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
RN7SKP47-201ENST00000365347 CECR2Q9BXF3 1484 aa12.41□□□□□ -0.42
RN7SKP47-201ENST00000365347 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
RN7SKP47-201ENST00000365347 DNAJC5BQ9UF47 199 aa12.38□□□□□ -0.43
RN7SKP47-201ENST00000365347 RSF1Q96T23 1441 aaPredicted RBP12.34□□□□□ -0.43
RN7SKP47-201ENST00000365347 BAZ1AQ9NRL2 1556 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP47-201ENST00000365347 MROH2BQ7Z745 1585 aa12.32□□□□□ -0.44
RN7SKP47-201ENST00000365347 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
RN7SKP47-201ENST00000365347 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
RN7SKP47-201ENST00000365347 EIF4G1Q04637 1599 aaKnown RBP12.21□□□□□ -0.46
RN7SKP47-201ENST00000365347 WIZO95785 1651 aa12.2□□□□□ -0.46
RN7SKP47-201ENST00000365347 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
RN7SKP47-201ENST00000365347 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
RN7SKP47-201ENST00000365347 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
RN7SKP47-201ENST00000365347 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
RN7SKP47-201ENST00000365347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
RN7SKP47-201ENST00000365347 TOP2AP11388 1531 aaKnown RBP12.08□□□□□ -0.48
RN7SKP47-201ENST00000365347 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
RN7SKP47-201ENST00000365347 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
RN7SKP47-201ENST00000365347 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
RN7SKP47-201ENST00000365347 HMGXB3Q12766 1538 aa12.02□□□□□ -0.48
RN7SKP47-201ENST00000365347 CCDC88BA6NC98 1476 aa11.97□□□□□ -0.49
RN7SKP47-201ENST00000365347 DSG3P32926 999 aa11.87□□□□□ -0.51
RN7SKP47-201ENST00000365347 U3KPZ7 1027 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP47-201ENST00000365347 KCNA4P22459 653 aa11.8□□□□□ -0.52
RN7SKP47-201ENST00000365347 CADPSQ9ULU8 1353 aa11.76□□□□□ -0.53
RN7SKP47-201ENST00000365347 CFTRP13569 1480 aa11.76□□□□□ -0.53
RN7SKP47-201ENST00000365347 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
RN7SKP47-201ENST00000365347 CAPN15O75808 1086 aa11.69□□□□□ -0.54
RN7SKP47-201ENST00000365347 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
RN7SKP47-201ENST00000365347 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
RN7SKP47-201ENST00000365347 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
RN7SKP47-201ENST00000365347 NESP48681 1621 aa11.66□□□□□ -0.54
RN7SKP47-201ENST00000365347 ABCC8Q09428 1581 aa11.65□□□□□ -0.54
RN7SKP47-201ENST00000365347 PRDM2Q13029 1718 aa11.64□□□□□ -0.55
RN7SKP47-201ENST00000365347 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
RN7SKP47-201ENST00000365347 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
RN7SKP47-201ENST00000365347 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
RN7SKP47-201ENST00000365347 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
RN7SKP47-201ENST00000365347 SYNJ1O43426 1573 aa11.54□□□□□ -0.56
RN7SKP47-201ENST00000365347 CEP164Q9UPV0 1460 aa11.54□□□□□ -0.56
RN7SKP47-201ENST00000365347 CUX1P39880 1505 aa11.53□□□□□ -0.56
RN7SKP47-201ENST00000365347 TOP2BQ02880 1626 aa11.53□□□□□ -0.56
RN7SKP47-201ENST00000365347 BIVM-ERCC5R4GMW8 1640 aa11.51□□□□□ -0.57
RN7SKP47-201ENST00000365347 KIF21AQ7Z4S6 1674 aa11.5□□□□□ -0.57
RN7SKP47-201ENST00000365347 APLP2Q06481 763 aa11.48□□□□□ -0.57
RN7SKP47-201ENST00000365347 TRHP20396 242 aaPredicted RBP11.47□□□□□ -0.57
RN7SKP47-201ENST00000365347 CHRDL2Q6WN34 429 aa11.47□□□□□ -0.57
RN7SKP47-201ENST00000365347 DNMBPQ6XZF7 1577 aa11.46□□□□□ -0.57
RN7SKP47-201ENST00000365347 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.57
RN7SKP47-201ENST00000365347 TOPBP1Q92547 1522 aa11.46□□□□□ -0.57
RN7SKP47-201ENST00000365347 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
RN7SKP47-201ENST00000365347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.45□□□□□ -0.58
RN7SKP47-201ENST00000365347 HNRNPUL2Q1KMD3 747 aaKnown RBP11.45□□□□□ -0.58
RN7SKP47-201ENST00000365347 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
RN7SKP47-201ENST00000365347 FAM9AQ8IZU1 332 aaPredicted RBP11.44□□□□□ -0.58
RN7SKP47-201ENST00000365347 MRC2Q9UBG0 1479 aa11.44□□□□□ -0.58
RN7SKP47-201ENST00000365347 SOGA1O94964 1423 aa11.43□□□□□ -0.58
RN7SKP47-201ENST00000365347 ABCB7O75027 752 aa11.42□□□□□ -0.58
RN7SKP47-201ENST00000365347 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
RN7SKP47-201ENST00000365347 POLA1P09884 1462 aaPredicted RBP11.39□□□□□ -0.59
RN7SKP47-201ENST00000365347 EEA1Q15075 1411 aa11.39□□□□□ -0.59
RN7SKP47-201ENST00000365347 RUSC2Q8N2Y8 1516 aa11.39□□□□□ -0.59
RN7SKP47-201ENST00000365347 SAMD1Q6SPF0 538 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms