RNA–Protein interactions for RNA: ENST00000309951.7

ACO1-201, Transcript of aconitase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACO1, Length 7,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACO1-201ENST00000309951 NISCHQ9Y2I1 1504 aa14.03□□□□□ -0.16
ACO1-201ENST00000309951 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
ACO1-201ENST00000309951 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
ACO1-201ENST00000309951 SUPT5HO00267 1087 aaKnown RBP12.94□□□□□ -0.34
ACO1-201ENST00000309951 EHMT2Q96KQ7 1210 aa12.57□□□□□ -0.4
ACO1-201ENST00000309951 FAM9AQ8IZU1 332 aaPredicted RBP12.39□□□□□ -0.43
ACO1-201ENST00000309951 ABCC9O60706 1549 aa12.35□□□□□ -0.43
ACO1-201ENST00000309951 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
ACO1-201ENST00000309951 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
ACO1-201ENST00000309951 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
ACO1-201ENST00000309951 TTBK1Q5TCY1 1321 aaPredicted RBP12.03□□□□□ -0.48
ACO1-201ENST00000309951 APLP2Q06481 763 aa11.94□□□□□ -0.5
ACO1-201ENST00000309951 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
ACO1-201ENST00000309951 CCDC180Q9P1Z9 1646 aa11.87□□□□□ -0.51
ACO1-201ENST00000309951 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
ACO1-201ENST00000309951 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
ACO1-201ENST00000309951 ERICH6Q7L0X2 663 aa11.76□□□□□ -0.53
ACO1-201ENST00000309951 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
ACO1-201ENST00000309951 SCRIBQ14160 1630 aa11.71□□□□□ -0.53
ACO1-201ENST00000309951 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
ACO1-201ENST00000309951 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
ACO1-201ENST00000309951 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
ACO1-201ENST00000309951 CCER1Q8TC90 406 aaPredicted RBP11.6□□□□□ -0.55
ACO1-201ENST00000309951 DCAF1Q9Y4B6 1507 aa11.57□□□□□ -0.56
ACO1-201ENST00000309951 PCGF6Q9BYE7 350 aa11.53□□□□□ -0.56
ACO1-201ENST00000309951 LOC105371045A0A1W2PR82 267 aa11.52□□□□□ -0.56
ACO1-201ENST00000309951 SLC4A1APQ9BWU0 796 aaKnown RBP11.48□□□□□ -0.57
ACO1-201ENST00000309951 MYO15BQ96JP2 1530 aa11.46□□□□□ -0.57
ACO1-201ENST00000309951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
ACO1-201ENST00000309951 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
ACO1-201ENST00000309951 RB1CC1Q8TDY2 1594 aa11.42□□□□□ -0.58
ACO1-201ENST00000309951 FBLN2P98095 1184 aa11.39□□□□□ -0.59
ACO1-201ENST00000309951 ITGAEP38570 1179 aa11.36□□□□□ -0.59
ACO1-201ENST00000309951 MYT1Q01538 1121 aa11.34□□□□□ -0.59
ACO1-201ENST00000309951 DAXXQ9UER7 740 aaPredicted RBP11.34□□□□□ -0.59
ACO1-201ENST00000309951 POLR3GLQ9BT43 218 aa11.32□□□□□ -0.6
ACO1-201ENST00000309951 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
ACO1-201ENST00000309951 ARID3CA6NKF2 412 aa11.28□□□□□ -0.6
ACO1-201ENST00000309951 NACADO15069 1562 aa11.26□□□□□ -0.61
ACO1-201ENST00000309951 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
ACO1-201ENST00000309951 P3H3Q8IVL6 736 aa11.24□□□□□ -0.61
ACO1-201ENST00000309951 NEFLP07196 543 aa11.2□□□□□ -0.62
ACO1-201ENST00000309951 BCANQ96GW7 911 aa11.19□□□□□ -0.62
ACO1-201ENST00000309951 CNGB1Q14028 1251 aaPredicted RBP11.16□□□□□ -0.62
ACO1-201ENST00000309951 RSF1Q96T23 1441 aaPredicted RBP11.16□□□□□ -0.62
ACO1-201ENST00000309951 CECR2Q9BXF3 1484 aa11.15□□□□□ -0.62
ACO1-201ENST00000309951 FAM50AQ14320 339 aaKnown RBP11.11□□□□□ -0.63
ACO1-201ENST00000309951 PLPPR3Q6T4P5 718 aa11.1□□□□□ -0.63
ACO1-201ENST00000309951 BAZ1BQ9UIG0 1483 aaKnown RBP11.09□□□□□ -0.63
ACO1-201ENST00000309951 TRIM26Q12899 539 aaPredicted RBP11.08□□□□□ -0.64
ACO1-201ENST00000309951 CENPBP07199 599 aaPredicted RBP11.08□□□□□ -0.64
ACO1-201ENST00000309951 CSRNP3Q8WYN3 585 aa11.07□□□□□ -0.64
ACO1-201ENST00000309951 CLSPNQ9HAW4 1339 aa11.05□□□□□ -0.64
ACO1-201ENST00000309951 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
ACO1-201ENST00000309951 ZBTB47Q9UFB7 747 aaPredicted RBP11.02□□□□□ -0.64
ACO1-201ENST00000309951 A0A0G2JS52 829 aa10.99□□□□□ -0.65
ACO1-201ENST00000309951 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
ACO1-201ENST00000309951 ZNF777Q9ULD5 760 aaPredicted RBP10.98□□□□□ -0.65
ACO1-201ENST00000309951 MROH2BQ7Z745 1585 aa10.96□□□□□ -0.65
ACO1-201ENST00000309951 ERCC6Q03468 1493 aa10.96□□□□□ -0.65
ACO1-201ENST00000309951 YTHDC1Q96MU7 727 aaKnown RBP10.95□□□□□ -0.66
ACO1-201ENST00000309951 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
ACO1-201ENST00000309951 BAZ1AQ9NRL2 1556 aaPredicted RBP10.93□□□□□ -0.66
ACO1-201ENST00000309951 CHMP7Q8WUX9 453 aaPredicted RBP10.92□□□□□ -0.66
ACO1-201ENST00000309951 ESF1Q9H501 851 aaKnown RBP10.92□□□□□ -0.66
ACO1-201ENST00000309951 SCAF1Q9H7N4 1312 aaKnown RBP10.9□□□□□ -0.67
ACO1-201ENST00000309951 NEUROD1Q13562 356 aa10.89□□□□□ -0.67
ACO1-201ENST00000309951 HRCP23327 699 aa10.89□□□□□ -0.67
ACO1-201ENST00000309951 WRNQ14191 1432 aaPredicted RBP eCLIP10.88□□□□□ -0.67
ACO1-201ENST00000309951 CCDC88BA6NC98 1476 aa10.85□□□□□ -0.67
ACO1-201ENST00000309951 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
ACO1-201ENST00000309951 CDK11BP21127 795 aaKnown RBP10.81□□□□□ -0.68
ACO1-201ENST00000309951 CDK11AQ9UQ88 783 aaPredicted RBP10.81□□□□□ -0.68
ACO1-201ENST00000309951 NEFMP07197 916 aa10.81□□□□□ -0.68
ACO1-201ENST00000309951 NCBP3Q53F19 620 aaKnown RBP10.78□□□□□ -0.68
ACO1-201ENST00000309951 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
ACO1-201ENST00000309951 WIZO95785 1651 aa10.77□□□□□ -0.68
ACO1-201ENST00000309951 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
ACO1-201ENST00000309951 ABCC8Q09428 1581 aa10.76□□□□□ -0.69
ACO1-201ENST00000309951 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
ACO1-201ENST00000309951 SMARCA2P51531 1590 aa10.75□□□□□ -0.69
ACO1-201ENST00000309951 SOGA1O94964 1423 aa10.74□□□□□ -0.69
ACO1-201ENST00000309951 ATAD2BQ9ULI0 1458 aa10.74□□□□□ -0.69
ACO1-201ENST00000309951 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
ACO1-201ENST00000309951 EIF4G1Q04637 1599 aaKnown RBP10.73□□□□□ -0.69
ACO1-201ENST00000309951 STAG3Q9UJ98 1225 aa10.72□□□□□ -0.69
ACO1-201ENST00000309951 CUX2O14529 1486 aa10.72□□□□□ -0.69
ACO1-201ENST00000309951 TOP2AP11388 1531 aaKnown RBP10.72□□□□□ -0.69
ACO1-201ENST00000309951 NPM2Q86SE8 214 aaKnown RBP10.71□□□□□ -0.69
ACO1-201ENST00000309951 CLIP1P30622 1438 aa10.71□□□□□ -0.7
ACO1-201ENST00000309951 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
ACO1-201ENST00000309951 GOLGA3Q08378 1498 aa10.7□□□□□ -0.7
ACO1-201ENST00000309951 SENP3Q9H4L4 574 aaPredicted RBP10.69□□□□□ -0.7
ACO1-201ENST00000309951 TDRD9Q8NDG6 1382 aaKnown RBP10.68□□□□□ -0.7
ACO1-201ENST00000309951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.68□□□□□ -0.73e-7■■□□□ 11.5
ACO1-201ENST00000309951 SMARCA4P51532 1647 aa10.68□□□□□ -0.7
ACO1-201ENST00000309951 PLEKHG5O94827 1062 aa10.67□□□□□ -0.7
ACO1-201ENST00000309951 CANXP27824 592 aaKnown RBP10.67□□□□□ -0.7
ACO1-201ENST00000309951 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
ACO1-201ENST00000309951 CEP162Q5TB80 1403 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms