RNA–Protein interactions for RNA: ENST00000305286.7

EFCAB3-201, Transcript of EF-hand calcium binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFCAB3, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3-201ENST00000305286 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
EFCAB3-201ENST00000305286 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
EFCAB3-201ENST00000305286 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
EFCAB3-201ENST00000305286 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
EFCAB3-201ENST00000305286 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
EFCAB3-201ENST00000305286 FOXD1Q16676 465 aa16.09■□□□□ 0.17
EFCAB3-201ENST00000305286 MSH5O43196 834 aa15.78■□□□□ 0.12
EFCAB3-201ENST00000305286 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
EFCAB3-201ENST00000305286 PIAS4Q8N2W9 510 aaPredicted RBP14.68□□□□□ -0.06
EFCAB3-201ENST00000305286 CACNB1Q02641 598 aaPredicted RBP14.46□□□□□ -0.09
EFCAB3-201ENST00000305286 ADRA2BP18089 450 aa14.05□□□□□ -0.16
EFCAB3-201ENST00000305286 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
EFCAB3-201ENST00000305286 POTEHQ6S545 545 aa13.8□□□□□ -0.2
EFCAB3-201ENST00000305286 KCNA4P22459 653 aa13.42□□□□□ -0.26
EFCAB3-201ENST00000305286 DMRT2Q9Y5R5 561 aa13.33□□□□□ -0.28
EFCAB3-201ENST00000305286 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
EFCAB3-201ENST00000305286 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
EFCAB3-201ENST00000305286 C1QBPQ07021 282 aaKnown RBP13.03□□□□□ -0.32
EFCAB3-201ENST00000305286 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
EFCAB3-201ENST00000305286 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
EFCAB3-201ENST00000305286 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
EFCAB3-201ENST00000305286 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
EFCAB3-201ENST00000305286 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
EFCAB3-201ENST00000305286 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
EFCAB3-201ENST00000305286 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
EFCAB3-201ENST00000305286 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
EFCAB3-201ENST00000305286 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
EFCAB3-201ENST00000305286 ZBTB22O15209 634 aa12.42□□□□□ -0.42
EFCAB3-201ENST00000305286 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
EFCAB3-201ENST00000305286 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
EFCAB3-201ENST00000305286 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
EFCAB3-201ENST00000305286 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
EFCAB3-201ENST00000305286 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
EFCAB3-201ENST00000305286 NISCHQ9Y2I1 1504 aa12.06□□□□□ -0.48
EFCAB3-201ENST00000305286 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
EFCAB3-201ENST00000305286 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
EFCAB3-201ENST00000305286 DSG3P32926 999 aa11.86□□□□□ -0.51
EFCAB3-201ENST00000305286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.79□□□□□ -0.52
EFCAB3-201ENST00000305286 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
EFCAB3-201ENST00000305286 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
EFCAB3-201ENST00000305286 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
EFCAB3-201ENST00000305286 CAPN15O75808 1086 aa11.59□□□□□ -0.55
EFCAB3-201ENST00000305286 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
EFCAB3-201ENST00000305286 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
EFCAB3-201ENST00000305286 RBM42Q9BTD8 480 aaKnown RBP11.46□□□□□ -0.57
EFCAB3-201ENST00000305286 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
EFCAB3-201ENST00000305286 LHX8Q68G74 356 aa11.44□□□□□ -0.58
EFCAB3-201ENST00000305286 HAX1O00165 279 aa11.39□□□□□ -0.59
EFCAB3-201ENST00000305286 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
EFCAB3-201ENST00000305286 FKBP8Q14318 412 aa11.35□□□□□ -0.59
EFCAB3-201ENST00000305286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.33□□□□□ -0.6
EFCAB3-201ENST00000305286 HNRNPUL2Q1KMD3 747 aaKnown RBP11.33□□□□□ -0.6
EFCAB3-201ENST00000305286 APLP2Q06481 763 aa11.24□□□□□ -0.61
EFCAB3-201ENST00000305286 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
EFCAB3-201ENST00000305286 RTN4Q9NQC3 1192 aaKnown RBP11.14□□□□□ -0.63
EFCAB3-201ENST00000305286 ABCB7O75027 752 aa11.12□□□□□ -0.63
EFCAB3-201ENST00000305286 TRHP20396 242 aaPredicted RBP11.12□□□□□ -0.63
EFCAB3-201ENST00000305286 PIP4P2Q8N4L2 257 aa11.12□□□□□ -0.63
EFCAB3-201ENST00000305286 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
EFCAB3-201ENST00000305286 EVX2Q03828 476 aa11.02□□□□□ -0.65
EFCAB3-201ENST00000305286 AMER1Q5JTC6 1135 aaPredicted RBP11□□□□□ -0.65
EFCAB3-201ENST00000305286 POLA2Q14181 598 aa10.93□□□□□ -0.66
EFCAB3-201ENST00000305286 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
EFCAB3-201ENST00000305286 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
EFCAB3-201ENST00000305286 POTEMA6NI47 508 aa10.84□□□□□ -0.67
EFCAB3-201ENST00000305286 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
EFCAB3-201ENST00000305286 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
EFCAB3-201ENST00000305286 FBLN2P98095 1184 aa10.82□□□□□ -0.68
EFCAB3-201ENST00000305286 PROM2Q8N271 834 aa10.81□□□□□ -0.68
EFCAB3-201ENST00000305286 GABBR2O75899 941 aa10.77□□□□□ -0.69
EFCAB3-201ENST00000305286 POTEGQ6S5H5 508 aa10.74□□□□□ -0.69
EFCAB3-201ENST00000305286 CCDC180Q9P1Z9 1646 aa10.71□□□□□ -0.69
EFCAB3-201ENST00000305286 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
EFCAB3-201ENST00000305286 FBXO3Q9UK99 471 aa10.69□□□□□ -0.7
EFCAB3-201ENST00000305286 SLC24A1O60721 1099 aa10.68□□□□□ -0.7
EFCAB3-201ENST00000305286 VASPP50552 380 aaPredicted RBP10.65□□□□□ -0.7
EFCAB3-201ENST00000305286 ZBTB12Q9Y330 459 aaPredicted RBP10.65□□□□□ -0.7
EFCAB3-201ENST00000305286 OSCARQ8IYS5 282 aa10.59□□□□□ -0.71
EFCAB3-201ENST00000305286 IFNLR1Q8IU57 520 aaPredicted RBP10.58□□□□□ -0.72
EFCAB3-201ENST00000305286 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
EFCAB3-201ENST00000305286 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
EFCAB3-201ENST00000305286 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
EFCAB3-201ENST00000305286 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
EFCAB3-201ENST00000305286 POTEIP0CG38 1075 aa10.47□□□□□ -0.73
EFCAB3-201ENST00000305286 SPDYE2BA6NHP3 402 aa10.46□□□□□ -0.74
EFCAB3-201ENST00000305286 SPDYE6P0CI01 402 aa10.46□□□□□ -0.74
EFCAB3-201ENST00000305286 SPDYE2Q495Y8 402 aa10.46□□□□□ -0.74
EFCAB3-201ENST00000305286 ABCC9O60706 1549 aa10.46□□□□□ -0.74
EFCAB3-201ENST00000305286 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
EFCAB3-201ENST00000305286 PKD2Q13563 968 aa10.41□□□□□ -0.74
EFCAB3-201ENST00000305286 OTUD5Q96G74 571 aa10.4□□□□□ -0.74
EFCAB3-201ENST00000305286 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
EFCAB3-201ENST00000305286 KLHL34Q8N239 644 aa10.31□□□□□ -0.76
EFCAB3-201ENST00000305286 PRKAR2AP13861 404 aaKnown RBP10.3□□□□□ -0.76
EFCAB3-201ENST00000305286 SPOCK2Q92563 424 aa10.29□□□□□ -0.76
EFCAB3-201ENST00000305286 PLCD3Q8N3E9 789 aa10.28□□□□□ -0.76
EFCAB3-201ENST00000305286 DCAF8L2P0C7V8 631 aa10.28□□□□□ -0.76
EFCAB3-201ENST00000305286 MIER1Q8N108 512 aa10.25□□□□□ -0.77
EFCAB3-201ENST00000305286 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
EFCAB3-201ENST00000305286 CLCN6P51797 869 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms