RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
RTL9-201ENST00000465301 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
RTL9-201ENST00000465301 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
RTL9-201ENST00000465301 APLP2Q06481 763 aa12.97□□□□□ -0.33
RTL9-201ENST00000465301 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
RTL9-201ENST00000465301 CCER1Q8TC90 406 aaPredicted RBP12.72□□□□□ -0.37
RTL9-201ENST00000465301 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
RTL9-201ENST00000465301 EHMT2Q96KQ7 1210 aa12.61□□□□□ -0.39
RTL9-201ENST00000465301 SHROOM4Q9ULL8 1493 aa12.53□□□□□ -0.4
RTL9-201ENST00000465301 NISCHQ9Y2I1 1504 aa12.45□□□□□ -0.42
RTL9-201ENST00000465301 CENPBP07199 599 aaPredicted RBP12.42□□□□□ -0.42
RTL9-201ENST00000465301 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
RTL9-201ENST00000465301 NEFLP07196 543 aa12.33□□□□□ -0.44
RTL9-201ENST00000465301 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
RTL9-201ENST00000465301 TTBK1Q5TCY1 1321 aaPredicted RBP12.23□□□□□ -0.45
RTL9-201ENST00000465301 PCGF6Q9BYE7 350 aa12.21□□□□□ -0.45
RTL9-201ENST00000465301 RANGAP1P46060 587 aaPredicted RBP12.19□□□□□ -0.46
RTL9-201ENST00000465301 MYT1Q01538 1121 aa12.15□□□□□ -0.46
RTL9-201ENST00000465301 DAXXQ9UER7 740 aaPredicted RBP12.15□□□□□ -0.46
RTL9-201ENST00000465301 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
RTL9-201ENST00000465301 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
RTL9-201ENST00000465301 MYT1LQ9UL68 1186 aa12.11□□□□□ -0.47
RTL9-201ENST00000465301 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
RTL9-201ENST00000465301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.94□□□□□ -0.5
RTL9-201ENST00000465301 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
RTL9-201ENST00000465301 POLR3GLQ9BT43 218 aa11.86□□□□□ -0.51
RTL9-201ENST00000465301 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
RTL9-201ENST00000465301 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
RTL9-201ENST00000465301 CLSPNQ9HAW4 1339 aa11.75□□□□□ -0.53
RTL9-201ENST00000465301 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
RTL9-201ENST00000465301 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.54
RTL9-201ENST00000465301 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
RTL9-201ENST00000465301 ITGAEP38570 1179 aa11.69□□□□□ -0.54
RTL9-201ENST00000465301 TRIM26Q12899 539 aaPredicted RBP11.64□□□□□ -0.55
RTL9-201ENST00000465301 NEFMP07197 916 aa11.57□□□□□ -0.56
RTL9-201ENST00000465301 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
RTL9-201ENST00000465301 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.57
RTL9-201ENST00000465301 TRIM52Q96A61 297 aa11.5□□□□□ -0.57
RTL9-201ENST00000465301 SLC24A1O60721 1099 aa11.46□□□□□ -0.58
RTL9-201ENST00000465301 FAM50AQ14320 339 aaKnown RBP11.45□□□□□ -0.58
RTL9-201ENST00000465301 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
RTL9-201ENST00000465301 BCANQ96GW7 911 aa11.44□□□□□ -0.58
RTL9-201ENST00000465301 HRCP23327 699 aa11.43□□□□□ -0.58
RTL9-201ENST00000465301 ESF1Q9H501 851 aaKnown RBP11.38□□□□□ -0.59
RTL9-201ENST00000465301 ANP32CO43423 234 aa11.36□□□□□ -0.59
RTL9-201ENST00000465301 CDK11AQ9UQ88 783 aaPredicted RBP11.35□□□□□ -0.59
RTL9-201ENST00000465301 ZNF326Q5BKZ1 582 aaKnown RBP11.32□□□□□ -0.6
RTL9-201ENST00000465301 ANP32BQ92688 251 aaKnown RBP11.31□□□□□ -0.6
RTL9-201ENST00000465301 FBLN2P98095 1184 aa11.28□□□□□ -0.6
RTL9-201ENST00000465301 NEUROD1Q13562 356 aa11.28□□□□□ -0.6
RTL9-201ENST00000465301 DIEXFQ68CQ4 756 aaKnown RBP11.28□□□□□ -0.6
RTL9-201ENST00000465301 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
RTL9-201ENST00000465301 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
RTL9-201ENST00000465301 CDK11BP21127 795 aaKnown RBP11.22□□□□□ -0.61
RTL9-201ENST00000465301 BCL11AQ9H165 835 aa11.22□□□□□ -0.61
RTL9-201ENST00000465301 UPF2Q9HAU5 1272 aaKnown RBP11.19□□□□□ -0.62
RTL9-201ENST00000465301 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
RTL9-201ENST00000465301 HSP90AA1P07900 732 aaKnown RBP11.19□□□□□ -0.62
RTL9-201ENST00000465301 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
RTL9-201ENST00000465301 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
RTL9-201ENST00000465301 ZNF777Q9ULD5 760 aaPredicted RBP11.09□□□□□ -0.63
RTL9-201ENST00000465301 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
RTL9-201ENST00000465301 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.08□□□□□ -0.64
RTL9-201ENST00000465301 PABPN1Q86U42 306 aaKnown RBP eCLIP11.06□□□□□ -0.64
RTL9-201ENST00000465301 GLIPR1L2Q4G1C9 344 aa11.06□□□□□ -0.64
RTL9-201ENST00000465301 ABCC9O60706 1549 aa11.03□□□□□ -0.64
RTL9-201ENST00000465301 MYH16Q9H6N6 1097 aa11.03□□□□□ -0.64
RTL9-201ENST00000465301 PLPPR3Q6T4P5 718 aa10.99□□□□□ -0.65
RTL9-201ENST00000465301 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
RTL9-201ENST00000465301 TONSLQ96HA7 1378 aa10.99□□□□□ -0.65
RTL9-201ENST00000465301 EIF5BO60841 1220 aaKnown RBP10.97□□□□□ -0.65
RTL9-201ENST00000465301 WDR43Q15061 677 aaKnown RBP eCLIP10.97□□□□□ -0.65
RTL9-201ENST00000465301 ARID3CA6NKF2 412 aa10.96□□□□□ -0.65
RTL9-201ENST00000465301 A0A0G2JS52 829 aa10.95□□□□□ -0.66
RTL9-201ENST00000465301 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
RTL9-201ENST00000465301 NCLP19338 710 aaKnown RBP10.95□□□□□ -0.66
RTL9-201ENST00000465301 GTF3C3Q9Y5Q9 886 aa10.94□□□□□ -0.66
RTL9-201ENST00000465301 ACIN1Q9UKV3 1341 aaKnown RBP10.91□□□□□ -0.66
RTL9-201ENST00000465301 ANP32EQ9BTT0 268 aa10.9□□□□□ -0.66
RTL9-201ENST00000465301 TSPY4P0CV99 314 aa10.89□□□□□ -0.67
RTL9-201ENST00000465301 TSPY10P0CW01 314 aa10.89□□□□□ -0.67
RTL9-201ENST00000465301 HAP1P54257 671 aaPredicted RBP10.89□□□□□ -0.67
RTL9-201ENST00000465301 ZRSR1Q15695 479 aaKnown RBP10.89□□□□□ -0.67
RTL9-201ENST00000465301 CSRNP3Q8WYN3 585 aa10.89□□□□□ -0.67
RTL9-201ENST00000465301 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
RTL9-201ENST00000465301 TMC1Q8TDI8 760 aa10.88□□□□□ -0.67
RTL9-201ENST00000465301 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
RTL9-201ENST00000465301 GOLGA6L22H0YM25 854 aa10.86□□□□□ -0.67
RTL9-201ENST00000465301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.85□□□□□ -0.67
RTL9-201ENST00000465301 BECN1Q14457 450 aa10.85□□□□□ -0.67
RTL9-201ENST00000465301 CASC1Q6TDU7 716 aa10.84□□□□□ -0.67
RTL9-201ENST00000465301 CCDC136Q96JN2 1154 aa10.84□□□□□ -0.67
RTL9-201ENST00000465301 HNRNPUQ00839 825 aaKnown RBP eCLIP10.84□□□□□ -0.67
RTL9-201ENST00000465301 ZBTB7CA1YPR0 619 aa10.84□□□□□ -0.67
RTL9-201ENST00000465301 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
RTL9-201ENST00000465301 CFAP53Q96M91 514 aa10.82□□□□□ -0.68
RTL9-201ENST00000465301 DDRGK1Q96HY6 314 aa10.81□□□□□ -0.68
RTL9-201ENST00000465301 FKBP8Q14318 412 aa10.79□□□□□ -0.68
RTL9-201ENST00000465301 CDCA8Q53HL2 280 aa10.79□□□□□ -0.68
RTL9-201ENST00000465301 GOLGA6L6A8MZA4 724 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms