RNA–Protein interactions for RNA: ENST00000439709.5

ALS2CR12-207, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ALS2CR12, Length 1,626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-207ENST00000439709 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
ALS2CR12-207ENST00000439709 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
ALS2CR12-207ENST00000439709 NISCHQ9Y2I1 1504 aa16.06■□□□□ 0.16
ALS2CR12-207ENST00000439709 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
ALS2CR12-207ENST00000439709 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
ALS2CR12-207ENST00000439709 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
ALS2CR12-207ENST00000439709 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
ALS2CR12-207ENST00000439709 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
ALS2CR12-207ENST00000439709 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
ALS2CR12-207ENST00000439709 ABCC9O60706 1549 aa13.34□□□□□ -0.27
ALS2CR12-207ENST00000439709 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
ALS2CR12-207ENST00000439709 DCAF1Q9Y4B6 1507 aa13.24□□□□□ -0.29
ALS2CR12-207ENST00000439709 FOXD1Q16676 465 aa13.23□□□□□ -0.29
ALS2CR12-207ENST00000439709 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
ALS2CR12-207ENST00000439709 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
ALS2CR12-207ENST00000439709 NACADO15069 1562 aa13.04□□□□□ -0.32
ALS2CR12-207ENST00000439709 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
ALS2CR12-207ENST00000439709 ADRA2BP18089 450 aa13.01□□□□□ -0.33
ALS2CR12-207ENST00000439709 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
ALS2CR12-207ENST00000439709 SCRIBQ14160 1630 aa12.87□□□□□ -0.35
ALS2CR12-207ENST00000439709 UNC13AQ9UPW8 1703 aa12.78□□□□□ -0.36
ALS2CR12-207ENST00000439709 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
ALS2CR12-207ENST00000439709 PABPN1Q86U42 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
ALS2CR12-207ENST00000439709 SUPT5HO00267 1087 aaKnown RBP12.55□□□□□ -0.4
ALS2CR12-207ENST00000439709 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
ALS2CR12-207ENST00000439709 PIAS4Q8N2W9 510 aaPredicted RBP12.52□□□□□ -0.4
ALS2CR12-207ENST00000439709 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
ALS2CR12-207ENST00000439709 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
ALS2CR12-207ENST00000439709 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
ALS2CR12-207ENST00000439709 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
ALS2CR12-207ENST00000439709 KCNA4P22459 653 aa12.34□□□□□ -0.43
ALS2CR12-207ENST00000439709 WIZO95785 1651 aa12.33□□□□□ -0.44
ALS2CR12-207ENST00000439709 MSH5O43196 834 aa12.27□□□□□ -0.44
ALS2CR12-207ENST00000439709 EIF4G1Q04637 1599 aaKnown RBP12.21□□□□□ -0.45
ALS2CR12-207ENST00000439709 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
ALS2CR12-207ENST00000439709 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
ALS2CR12-207ENST00000439709 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
ALS2CR12-207ENST00000439709 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
ALS2CR12-207ENST00000439709 SMARCA2P51531 1590 aa12.11□□□□□ -0.47
ALS2CR12-207ENST00000439709 NCAPD3P42695 1498 aa12.09□□□□□ -0.47
ALS2CR12-207ENST00000439709 CCDC88BA6NC98 1476 aa12.07□□□□□ -0.48
ALS2CR12-207ENST00000439709 CC2D2AQ9P2K1 1620 aa12.07□□□□□ -0.48
ALS2CR12-207ENST00000439709 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
ALS2CR12-207ENST00000439709 HMGXB3Q12766 1538 aa12□□□□□ -0.49
ALS2CR12-207ENST00000439709 DNAJC5BQ9UF47 199 aa11.97□□□□□ -0.49
ALS2CR12-207ENST00000439709 NCBP3Q53F19 620 aaKnown RBP11.85□□□□□ -0.51
ALS2CR12-207ENST00000439709 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
ALS2CR12-207ENST00000439709 NPM3O75607 178 aaKnown RBP11.82□□□□□ -0.52
ALS2CR12-207ENST00000439709 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
ALS2CR12-207ENST00000439709 CFTRP13569 1480 aa11.79□□□□□ -0.52
ALS2CR12-207ENST00000439709 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
ALS2CR12-207ENST00000439709 CADPSQ9ULU8 1353 aa11.76□□□□□ -0.53
ALS2CR12-207ENST00000439709 SLC4A1APQ9BWU0 796 aaKnown RBP11.74□□□□□ -0.53
ALS2CR12-207ENST00000439709 NESP48681 1621 aa11.73□□□□□ -0.53
ALS2CR12-207ENST00000439709 MAPK8IP2Q13387 824 aaPredicted RBP11.72□□□□□ -0.53
ALS2CR12-207ENST00000439709 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
ALS2CR12-207ENST00000439709 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
ALS2CR12-207ENST00000439709 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
ALS2CR12-207ENST00000439709 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
ALS2CR12-207ENST00000439709 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
ALS2CR12-207ENST00000439709 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
ALS2CR12-207ENST00000439709 CUX1P39880 1505 aa11.62□□□□□ -0.55
ALS2CR12-207ENST00000439709 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
ALS2CR12-207ENST00000439709 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
ALS2CR12-207ENST00000439709 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
ALS2CR12-207ENST00000439709 BIVM-ERCC5R4GMW8 1640 aa11.59□□□□□ -0.55
ALS2CR12-207ENST00000439709 FAM9AQ8IZU1 332 aaPredicted RBP11.59□□□□□ -0.55
ALS2CR12-207ENST00000439709 RUSC2Q8N2Y8 1516 aa11.58□□□□□ -0.56
ALS2CR12-207ENST00000439709 SOGA1O94964 1423 aa11.57□□□□□ -0.56
ALS2CR12-207ENST00000439709 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
ALS2CR12-207ENST00000439709 KIF21AQ7Z4S6 1674 aa11.56□□□□□ -0.56
ALS2CR12-207ENST00000439709 PDS5BQ9NTI5 1447 aa11.54□□□□□ -0.56
ALS2CR12-207ENST00000439709 URB2Q14146 1524 aaKnown RBP11.51□□□□□ -0.57
ALS2CR12-207ENST00000439709 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
ALS2CR12-207ENST00000439709 TOPBP1Q92547 1522 aa11.49□□□□□ -0.57
ALS2CR12-207ENST00000439709 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
ALS2CR12-207ENST00000439709 FGD5Q6ZNL6 1462 aa11.47□□□□□ -0.57
ALS2CR12-207ENST00000439709 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
ALS2CR12-207ENST00000439709 RAD54L2Q9Y4B4 1467 aa11.43□□□□□ -0.58
ALS2CR12-207ENST00000439709 DMRT2Q9Y5R5 561 aa11.42□□□□□ -0.58
ALS2CR12-207ENST00000439709 ZBTB22O15209 634 aa11.42□□□□□ -0.58
ALS2CR12-207ENST00000439709 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
ALS2CR12-207ENST00000439709 EEA1Q15075 1411 aa11.41□□□□□ -0.58
ALS2CR12-207ENST00000439709 MRC2Q9UBG0 1479 aa11.4□□□□□ -0.58
ALS2CR12-207ENST00000439709 CUX2O14529 1486 aa11.37□□□□□ -0.59
ALS2CR12-207ENST00000439709 ERCC6Q03468 1493 aa11.37□□□□□ -0.59
ALS2CR12-207ENST00000439709 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
ALS2CR12-207ENST00000439709 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
ALS2CR12-207ENST00000439709 IGF1RP08069 1367 aa11.36□□□□□ -0.59
ALS2CR12-207ENST00000439709 THOC2Q8NI27 1593 aaKnown RBP11.36□□□□□ -0.59
ALS2CR12-207ENST00000439709 WDR62O43379 1518 aa11.36□□□□□ -0.59
ALS2CR12-207ENST00000439709 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
ALS2CR12-207ENST00000439709 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
ALS2CR12-207ENST00000439709 TDRD9Q8NDG6 1382 aaKnown RBP11.32□□□□□ -0.6
ALS2CR12-207ENST00000439709 PRXQ9BXM0 1461 aa11.32□□□□□ -0.6
ALS2CR12-207ENST00000439709 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
ALS2CR12-207ENST00000439709 KIF21BO75037 1637 aa11.31□□□□□ -0.6
ALS2CR12-207ENST00000439709 RAPGEF2Q9Y4G8 1499 aa11.31□□□□□ -0.6
ALS2CR12-207ENST00000439709 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
ALS2CR12-207ENST00000439709 GOLGA3Q08378 1498 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms