RNA–Protein interactions for RNA: ENST00000268613.14

CDH13-201, Transcript of cadherin 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CDH13, Length 2,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-201ENST00000268613 SLC24A1O60721 1099 aa14.95□□□□□ -0.02
CDH13-201ENST00000268613 NISCHQ9Y2I1 1504 aa14.91□□□□□ -0.02
CDH13-201ENST00000268613 MYT1Q01538 1121 aa14.03□□□□□ -0.16
CDH13-201ENST00000268613 PRKCSHP14314 528 aaPredicted RBP13.97□□□□□ -0.17
CDH13-201ENST00000268613 PELP1Q8IZL8 1130 aaKnown RBP13.96□□□□□ -0.17
CDH13-201ENST00000268613 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
CDH13-201ENST00000268613 DAXXQ9UER7 740 aaPredicted RBP13.8□□□□□ -0.2
CDH13-201ENST00000268613 APLP2Q06481 763 aa13.73□□□□□ -0.21
CDH13-201ENST00000268613 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
CDH13-201ENST00000268613 CCDC180Q9P1Z9 1646 aa13.48□□□□□ -0.25
CDH13-201ENST00000268613 PLPPR3Q6T4P5 718 aa13.33□□□□□ -0.28
CDH13-201ENST00000268613 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
CDH13-201ENST00000268613 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
CDH13-201ENST00000268613 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
CDH13-201ENST00000268613 EIF5BO60841 1220 aaKnown RBP12.95□□□□□ -0.34
CDH13-201ENST00000268613 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
CDH13-201ENST00000268613 BCL11AQ9H165 835 aa12.8□□□□□ -0.36
CDH13-201ENST00000268613 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
CDH13-201ENST00000268613 ARXQ96QS3 562 aa12.75□□□□□ -0.37
CDH13-201ENST00000268613 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
CDH13-201ENST00000268613 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
CDH13-201ENST00000268613 ABCC9O60706 1549 aa12.65□□□□□ -0.38
CDH13-201ENST00000268613 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
CDH13-201ENST00000268613 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
CDH13-201ENST00000268613 NACADO15069 1562 aa12.56□□□□□ -0.4
CDH13-201ENST00000268613 RANGAP1P46060 587 aaPredicted RBP12.55□□□□□ -0.4
CDH13-201ENST00000268613 TULP1O00294 542 aaPredicted RBP12.53□□□□□ -0.4
CDH13-201ENST00000268613 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
CDH13-201ENST00000268613 RB1CC1Q8TDY2 1594 aa12.51□□□□□ -0.41
CDH13-201ENST00000268613 ZCCHC6Q5VYS8 1495 aaKnown RBP12.47□□□□□ -0.41
CDH13-201ENST00000268613 KCNA4P22459 653 aa12.44□□□□□ -0.42
CDH13-201ENST00000268613 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
CDH13-201ENST00000268613 HOMEZQ8IX15 550 aa12.33□□□□□ -0.44
CDH13-201ENST00000268613 TAOK2Q9UL54 1235 aa12.28□□□□□ -0.44
CDH13-201ENST00000268613 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
CDH13-201ENST00000268613 AEBP2Q6ZN18 517 aaPredicted RBP12.25□□□□□ -0.45
CDH13-201ENST00000268613 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
CDH13-201ENST00000268613 CHIC1Q5VXU3 224 aa12.18□□□□□ -0.46
CDH13-201ENST00000268613 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
CDH13-201ENST00000268613 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
CDH13-201ENST00000268613 BICRAQ9NZM4 1560 aa12.07□□□□□ -0.48
CDH13-201ENST00000268613 NPM2Q86SE8 214 aaKnown RBP12.04□□□□□ -0.48
CDH13-201ENST00000268613 UBE2Q2Q8WVN8 375 aa12.04□□□□□ -0.48
CDH13-201ENST00000268613 PDIA4P13667 645 aaKnown RBP12.02□□□□□ -0.49
CDH13-201ENST00000268613 C14orf37Q86TY3 774 aa11.95□□□□□ -0.5
CDH13-201ENST00000268613 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
CDH13-201ENST00000268613 SCRIBQ14160 1630 aa11.94□□□□□ -0.5
CDH13-201ENST00000268613 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
CDH13-201ENST00000268613 HRCP23327 699 aa11.92□□□□□ -0.5
CDH13-201ENST00000268613 BCANQ96GW7 911 aa11.91□□□□□ -0.5
CDH13-201ENST00000268613 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
CDH13-201ENST00000268613 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
CDH13-201ENST00000268613 PDE4CQ08493 712 aa11.85□□□□□ -0.51
CDH13-201ENST00000268613 PKNOX2Q96KN3 472 aa11.83□□□□□ -0.52
CDH13-201ENST00000268613 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
CDH13-201ENST00000268613 CHMP4AQ9BY43 222 aa11.8□□□□□ -0.52
CDH13-201ENST00000268613 TRIM26Q12899 539 aaPredicted RBP11.78□□□□□ -0.52
CDH13-201ENST00000268613 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.52
CDH13-201ENST00000268613 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
CDH13-201ENST00000268613 CENPBP07199 599 aaPredicted RBP11.72□□□□□ -0.53
CDH13-201ENST00000268613 EIF4G1Q04637 1599 aaKnown RBP11.72□□□□□ -0.53
CDH13-201ENST00000268613 SAMD1Q6SPF0 538 aaPredicted RBP11.69□□□□□ -0.54
CDH13-201ENST00000268613 NEFLP07196 543 aa11.67□□□□□ -0.54
CDH13-201ENST00000268613 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDH13-201ENST00000268613 BCL11BQ9C0K0 894 aaPredicted RBP11.67□□□□□ -0.54
CDH13-201ENST00000268613 TMEM132AQ24JP5 1023 aa11.66□□□□□ -0.54
CDH13-201ENST00000268613 PLCB2Q00722 1185 aa11.65□□□□□ -0.55
CDH13-201ENST00000268613 FBXO3Q9UK99 471 aa11.65□□□□□ -0.55
CDH13-201ENST00000268613 CC2D2AQ9P2K1 1620 aa11.63□□□□□ -0.55
CDH13-201ENST00000268613 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
CDH13-201ENST00000268613 BAZ1AQ9NRL2 1556 aaPredicted RBP11.6□□□□□ -0.55
CDH13-201ENST00000268613 TAF7LQ5H9L4 462 aa11.59□□□□□ -0.55
CDH13-201ENST00000268613 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
CDH13-201ENST00000268613 SUPT5HO00267 1087 aaKnown RBP11.58□□□□□ -0.56
CDH13-201ENST00000268613 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
CDH13-201ENST00000268613 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
CDH13-201ENST00000268613 SMARCA2P51531 1590 aa11.55□□□□□ -0.56
CDH13-201ENST00000268613 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
CDH13-201ENST00000268613 FGD1P98174 961 aa11.54□□□□□ -0.56
CDH13-201ENST00000268613 BRD2P25440 801 aaKnown RBP11.53□□□□□ -0.56
CDH13-201ENST00000268613 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
CDH13-201ENST00000268613 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
CDH13-201ENST00000268613 CNKSR2Q8WXI2 1034 aa11.48□□□□□ -0.57
CDH13-201ENST00000268613 CECR2Q9BXF3 1484 aa11.47□□□□□ -0.57
CDH13-201ENST00000268613 ANP32EQ9BTT0 268 aa11.47□□□□□ -0.57
CDH13-201ENST00000268613 DNAJC5BQ9UF47 199 aa11.45□□□□□ -0.58
CDH13-201ENST00000268613 CCDC136Q96JN2 1154 aa11.44□□□□□ -0.58
CDH13-201ENST00000268613 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
CDH13-201ENST00000268613 CDK11BP21127 795 aaKnown RBP11.42□□□□□ -0.58
CDH13-201ENST00000268613 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
CDH13-201ENST00000268613 IGSF3O75054 1194 aa11.41□□□□□ -0.58
CDH13-201ENST00000268613 MROH2BQ7Z745 1585 aa11.38□□□□□ -0.59
CDH13-201ENST00000268613 A0A0U1RQG5 324 aaPredicted RBP11.35□□□□□ -0.59
CDH13-201ENST00000268613 BAZ1BQ9UIG0 1483 aaKnown RBP11.33□□□□□ -0.6
CDH13-201ENST00000268613 PAXIP1Q6ZW49 1069 aaPredicted RBP11.32□□□□□ -0.6
CDH13-201ENST00000268613 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
CDH13-201ENST00000268613 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
CDH13-201ENST00000268613 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
CDH13-201ENST00000268613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDH13-201ENST00000268613 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms