RNA–Protein interactions for RNA: ENST00000276533.3

GINS4-201, Transcript of GINS complex subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS4, Length 3,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-201ENST00000276533 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
GINS4-201ENST00000276533 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
GINS4-201ENST00000276533 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
GINS4-201ENST00000276533 MYO15BQ96JP2 1530 aa16.41■□□□□ 0.22
GINS4-201ENST00000276533 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
GINS4-201ENST00000276533 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
GINS4-201ENST00000276533 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
GINS4-201ENST00000276533 EIF4G1Q04637 1599 aaKnown RBP15.52■□□□□ 0.08
GINS4-201ENST00000276533 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
GINS4-201ENST00000276533 ABCC9O60706 1549 aa15.34■□□□□ 0.05
GINS4-201ENST00000276533 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
GINS4-201ENST00000276533 NACADO15069 1562 aa15.25■□□□□ 0.03
GINS4-201ENST00000276533 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
GINS4-201ENST00000276533 BICRAQ9NZM4 1560 aa15.1■□□□□ 0.01
GINS4-201ENST00000276533 PRDM2Q13029 1718 aa15.07■□□□□ 0
GINS4-201ENST00000276533 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
GINS4-201ENST00000276533 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.05
GINS4-201ENST00000276533 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
GINS4-201ENST00000276533 SMARCA4P51532 1647 aa14.56□□□□□ -0.08
GINS4-201ENST00000276533 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
GINS4-201ENST00000276533 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
GINS4-201ENST00000276533 PHF23Q9BUL5 403 aaPredicted RBP14.49□□□□□ -0.09
GINS4-201ENST00000276533 SCRIBQ14160 1630 aa14.42□□□□□ -0.1
GINS4-201ENST00000276533 WDR97A6NE52 1622 aa14.38□□□□□ -0.11
GINS4-201ENST00000276533 BIVM-ERCC5R4GMW8 1640 aa14.37□□□□□ -0.11
GINS4-201ENST00000276533 TOP2AP11388 1531 aaKnown RBP14.35□□□□□ -0.11
GINS4-201ENST00000276533 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
GINS4-201ENST00000276533 WIZO95785 1651 aa14.29□□□□□ -0.12
GINS4-201ENST00000276533 PLPPR3Q6T4P5 718 aa14.28□□□□□ -0.12
GINS4-201ENST00000276533 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
GINS4-201ENST00000276533 RSF1Q96T23 1441 aaPredicted RBP14.15□□□□□ -0.14
GINS4-201ENST00000276533 CECR2Q9BXF3 1484 aa13.92□□□□□ -0.18
GINS4-201ENST00000276533 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
GINS4-201ENST00000276533 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
GINS4-201ENST00000276533 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
GINS4-201ENST00000276533 KIF21BO75037 1637 aa13.8□□□□□ -0.2
GINS4-201ENST00000276533 KCNA4P22459 653 aa13.78□□□□□ -0.2
GINS4-201ENST00000276533 LRRIQ1Q96JM4 1722 aa13.71□□□□□ -0.21
GINS4-201ENST00000276533 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
GINS4-201ENST00000276533 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
GINS4-201ENST00000276533 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
GINS4-201ENST00000276533 ABCA5Q8WWZ7 1642 aa13.67□□□□□ -0.22
GINS4-201ENST00000276533 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
GINS4-201ENST00000276533 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
GINS4-201ENST00000276533 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
GINS4-201ENST00000276533 CFTRP13569 1480 aa13.53□□□□□ -0.24
GINS4-201ENST00000276533 ERICH3Q5RHP9 1530 aa13.52□□□□□ -0.25
GINS4-201ENST00000276533 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.25
GINS4-201ENST00000276533 CTTNBP2Q8WZ74 1663 aa13.51□□□□□ -0.25
GINS4-201ENST00000276533 CC2D2AQ9P2K1 1620 aa13.5□□□□□ -0.25
GINS4-201ENST00000276533 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
GINS4-201ENST00000276533 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
GINS4-201ENST00000276533 PBRM1Q86U86 1689 aa13.46□□□□□ -0.26
GINS4-201ENST00000276533 SAMD9Q5K651 1589 aa13.44□□□□□ -0.26
GINS4-201ENST00000276533 DCAF8L2P0C7V8 631 aa13.41□□□□□ -0.26
GINS4-201ENST00000276533 CUX1P39880 1505 aa13.4□□□□□ -0.26
GINS4-201ENST00000276533 CUL7Q14999 1698 aa13.37□□□□□ -0.27
GINS4-201ENST00000276533 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
GINS4-201ENST00000276533 ADRA2BP18089 450 aa13.33□□□□□ -0.28
GINS4-201ENST00000276533 WDR62O43379 1518 aa13.32□□□□□ -0.28
GINS4-201ENST00000276533 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
GINS4-201ENST00000276533 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
GINS4-201ENST00000276533 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
GINS4-201ENST00000276533 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
GINS4-201ENST00000276533 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.29
GINS4-201ENST00000276533 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
GINS4-201ENST00000276533 PRXQ9BXM0 1461 aa13.24□□□□□ -0.29
GINS4-201ENST00000276533 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
GINS4-201ENST00000276533 ADCY10Q96PN6 1610 aa13.23□□□□□ -0.29
GINS4-201ENST00000276533 ABCC8Q09428 1581 aa13.16□□□□□ -0.3
GINS4-201ENST00000276533 CUX2O14529 1486 aa13.15□□□□□ -0.3
GINS4-201ENST00000276533 ABCA10Q8WWZ4 1543 aa13.14□□□□□ -0.31
GINS4-201ENST00000276533 EEA1Q15075 1411 aa13.12□□□□□ -0.31
GINS4-201ENST00000276533 CROCC2H7BZ55 1655 aa13.08□□□□□ -0.31
GINS4-201ENST00000276533 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
GINS4-201ENST00000276533 MYT1Q01538 1121 aa13.03□□□□□ -0.32
GINS4-201ENST00000276533 BCORL1Q5H9F3 1711 aa13.01□□□□□ -0.33
GINS4-201ENST00000276533 RUSC2Q8N2Y8 1516 aa13□□□□□ -0.33
GINS4-201ENST00000276533 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
GINS4-201ENST00000276533 POLR1AO95602 1720 aaPredicted RBP12.99□□□□□ -0.33
GINS4-201ENST00000276533 URB2Q14146 1524 aaKnown RBP12.99□□□□□ -0.33
GINS4-201ENST00000276533 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.332e-6■■■■■ 26.9
GINS4-201ENST00000276533 GCC2Q8IWJ2 1684 aa12.92□□□□□ -0.34
GINS4-201ENST00000276533 SNAPC4Q5SXM2 1469 aa12.89□□□□□ -0.35
GINS4-201ENST00000276533 EFCAB5A4FU69 1503 aa12.89□□□□□ -0.35
GINS4-201ENST00000276533 TOPBP1Q92547 1522 aa12.89□□□□□ -0.35
GINS4-201ENST00000276533 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
GINS4-201ENST00000276533 ARAP1Q96P48 1450 aa12.88□□□□□ -0.35
GINS4-201ENST00000276533 SUPT5HO00267 1087 aaKnown RBP12.86□□□□□ -0.35
GINS4-201ENST00000276533 UGGT2Q9NYU1 1516 aa12.84□□□□□ -0.35
GINS4-201ENST00000276533 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.35
GINS4-201ENST00000276533 IQGAP2Q13576 1575 aa12.83□□□□□ -0.36
GINS4-201ENST00000276533 ZBTB22O15209 634 aa12.83□□□□□ -0.36
GINS4-201ENST00000276533 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
GINS4-201ENST00000276533 KDM5BQ9UGL1 1544 aa12.76□□□□□ -0.37
GINS4-201ENST00000276533 POLA1P09884 1462 aaPredicted RBP12.76□□□□□ -0.37
GINS4-201ENST00000276533 CDC42BPAQ5VT25 1732 aa12.72□□□□□ -0.37
GINS4-201ENST00000276533 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.37
GINS4-201ENST00000276533 TIAM1Q13009 1591 aa12.71□□□□□ -0.37
GINS4-201ENST00000276533 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms