Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 PHGDH-210ENST00000641115 1638 ntBASIC21■□□□□ 0.95
GTF3C4Q9UKN8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 KRT16P5-201ENST00000455284 522 ntBASIC21■□□□□ 0.95
GTF3C4Q9UKN8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 TFP1-202ENST00000475455 1573 ntBASIC21■□□□□ 0.95
GTF3C4Q9UKN8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21■□□□□ 0.95
GTF3C4Q9UKN8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 RARRES2P10-201ENST00000564312 460 ntBASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 AC233702.5-201ENST00000584107 538 ntBASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF3C4Q9UKN8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 AC012618.2-201ENST00000428058 849 ntBASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF3C4Q9UKN8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 SNORA78-201ENST00000459373 127 ntBASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 AC004264.1-201ENST00000608354 794 ntBASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.97■□□□□ 0.95
GTF3C4Q9UKN8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms