Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3LQ9H3M9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 MESTP1-201ENST00000404287 994 ntBASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 AC004980.1-204ENST00000429707 299 ntBASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 B3GAT3P1-201ENST00000471720 806 ntBASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 AC010947.1-201ENST00000623454 693 ntBASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
ATXN3LQ9H3M9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 BX119927.1-201ENST00000636596 1552 ntBASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 AC011506.1-201ENST00000474329 610 ntBASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 KRT18P22-201ENST00000402024 1347 ntBASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.47■□□□□ 0.87
ATXN3LQ9H3M9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 AC005521.1-201ENST00000393351 872 ntBASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 AC092865.7-201ENST00000641832 219 ntBASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3LQ9H3M9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3LQ9H3M9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3LQ9H3M9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.45■□□□□ 0.86
ATXN3LQ9H3M9 AL162377.1-201ENST00000618844 1793 ntBASIC20.45■□□□□ 0.86
ATXN3LQ9H3M9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3LQ9H3M9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3LQ9H3M9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms