Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 AC110285.5-201ENST00000611501 352 ntBASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM60Q9H2L4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM60Q9H2L4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.05■■□□□ 1.12
TMEM60Q9H2L4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 GCSHP5-201ENST00000443090 522 ntBASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 KRT16P5-201ENST00000455284 522 ntBASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM60Q9H2L4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 C1QL1P1-201ENST00000568105 661 ntBASIC22.03■■□□□ 1.12
TMEM60Q9H2L4 LINC01465-201ENST00000408887 1940 ntBASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms