Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 MKRN4P-201ENST00000444706 1521 ntBASIC17.5■□□□□ 0.39
PTP4A1Q93096 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTP4A1Q93096 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PTP4A1Q93096 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PTP4A1Q93096 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTP4A1Q93096 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.49■□□□□ 0.39
PTP4A1Q93096 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
PTP4A1Q93096 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTP4A1Q93096 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTP4A1Q93096 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTP4A1Q93096 GPX1P1-201ENST00000388829 606 ntBASIC17.49■□□□□ 0.39
PTP4A1Q93096 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.49■□□□□ 0.39
PTP4A1Q93096 NCF1B-203ENST00000435988 1254 ntBASIC17.49■□□□□ 0.39
PTP4A1Q93096 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTP4A1Q93096 AC090192.1-201ENST00000517740 490 ntBASIC17.49■□□□□ 0.39
PTP4A1Q93096 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.49■□□□□ 0.39
PTP4A1Q93096 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PTP4A1Q93096 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTP4A1Q93096 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTP4A1Q93096 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.49■□□□□ 0.39
PTP4A1Q93096 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PTP4A1Q93096 AL138781.2-201ENST00000617896 1843 ntBASIC17.49■□□□□ 0.39
PTP4A1Q93096 CROCCP3-202ENST00000420820 1947 ntBASIC17.49■□□□□ 0.39
PTP4A1Q93096 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTP4A1Q93096 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 AC120498.9-201ENST00000339021 3867 ntBASIC17.48■□□□□ 0.39
PTP4A1Q93096 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 AL161938.1-201ENST00000569833 2180 ntBASIC17.48■□□□□ 0.39
PTP4A1Q93096 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 TFP1-202ENST00000475455 1573 ntBASIC17.48■□□□□ 0.39
PTP4A1Q93096 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
PTP4A1Q93096 NEFHP1-201ENST00000412845 2629 ntBASIC17.48■□□□□ 0.39
PTP4A1Q93096 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTP4A1Q93096 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.47■□□□□ 0.39
PTP4A1Q93096 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTP4A1Q93096 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.47■□□□□ 0.39
PTP4A1Q93096 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms