Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF217Q8TC41 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF217Q8TC41 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF217Q8TC41 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 AC093503.3-201ENST00000624917 2352 ntBASIC18.7■□□□□ 0.58
RNF217Q8TC41 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF217Q8TC41 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF217Q8TC41 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF217Q8TC41 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF217Q8TC41 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF217Q8TC41 AL512408.1-201ENST00000569378 2000 ntBASIC18.69■□□□□ 0.58
RNF217Q8TC41 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF217Q8TC41 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF217Q8TC41 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF217Q8TC41 NTF6G-201ENST00000591094 616 ntBASIC18.69■□□□□ 0.58
RNF217Q8TC41 UBE2DNL-204ENST00000602536 740 ntBASIC18.69■□□□□ 0.58
RNF217Q8TC41 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RNF217Q8TC41 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF217Q8TC41 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RNF217Q8TC41 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF217Q8TC41 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF217Q8TC41 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF217Q8TC41 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms