Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TMEFF1Q8IYR6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.41■□□□□ 0.7
TMEFF1Q8IYR6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEFF1Q8IYR6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEFF1Q8IYR6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEFF1Q8IYR6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEFF1Q8IYR6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEFF1Q8IYR6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEFF1Q8IYR6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 KRT18P56-201ENST00000507275 550 ntBASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 AC141257.4-201ENST00000634557 245 ntBASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 AC136944.6-201ENST00000634818 245 ntBASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEFF1Q8IYR6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.39■□□□□ 0.7
TMEFF1Q8IYR6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEFF1Q8IYR6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.39■□□□□ 0.7
TMEFF1Q8IYR6 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.39■□□□□ 0.7
TMEFF1Q8IYR6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.39■□□□□ 0.7
TMEFF1Q8IYR6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 AC011558.1-201ENST00000623459 338 ntBASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 AC010653.2-201ENST00000623505 997 ntBASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 SMG8-203ENST00000578922 2178 ntBASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEFF1Q8IYR6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 AC092338.2-201ENST00000568827 1415 ntBASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 AP000550.4-202ENST00000639755 178 ntBASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEFF1Q8IYR6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 TMEM179-206ENST00000616017 1645 ntBASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEFF1Q8IYR6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEFF1Q8IYR6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms