Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDC42P60953 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC42P60953 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDC42P60953 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDC42P60953 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC42P60953 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.83■□□□□ 0.44
CDC42P60953 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDC42P60953 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC42P60953 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDC42P60953 AL591742.1-201ENST00000604433 565 ntBASIC17.83■□□□□ 0.44
CDC42P60953 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC42P60953 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDC42P60953 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDC42P60953 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC42P60953 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC42P60953 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDC42P60953 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.83■□□□□ 0.44
CDC42P60953 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDC42P60953 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.83■□□□□ 0.44
CDC42P60953 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDC42P60953 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDC42P60953 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CDC42P60953 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.82■□□□□ 0.44
CDC42P60953 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDC42P60953 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDC42P60953 AL161938.1-201ENST00000569833 2180 ntBASIC17.82■□□□□ 0.44
CDC42P60953 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.82■□□□□ 0.44
CDC42P60953 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.82■□□□□ 0.44
CDC42P60953 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.82■□□□□ 0.44
CDC42P60953 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CDC42P60953 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC42P60953 AC007613.1-201ENST00000572811 2597 ntBASIC17.82■□□□□ 0.44
CDC42P60953 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDC42P60953 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDC42P60953 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.81■□□□□ 0.44
CDC42P60953 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CDC42P60953 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CDC42P60953 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDC42P60953 AC123595.1-201ENST00000440769 1046 ntBASIC17.81■□□□□ 0.44
CDC42P60953 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDC42P60953 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDC42P60953 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDC42P60953 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.81■□□□□ 0.44
CDC42P60953 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CDC42P60953 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.81■□□□□ 0.44
CDC42P60953 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC42P60953 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDC42P60953 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.8■□□□□ 0.44
CDC42P60953 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.8■□□□□ 0.44
CDC42P60953 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.8■□□□□ 0.44
CDC42P60953 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.8■□□□□ 0.44
CDC42P60953 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CDC42P60953 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.8■□□□□ 0.44
CDC42P60953 AC142381.2-201ENST00000566120 298 ntBASIC17.8■□□□□ 0.44
CDC42P60953 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.8■□□□□ 0.44
CDC42P60953 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 HTR7P1-202ENST00000624664 4411 ntBASIC17.8■□□□□ 0.44
CDC42P60953 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms